RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 PCYOX1Q9UHG3 505 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TSC22D4Q9Y3Q8 395 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 MFHAS1Q9Y4C4 1052 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 FADS3Q9Y5Q0 445 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CSPG5O95196 566 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 PTPN9P43378 593 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 ALDH7A1P49419 539 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 ARSEP51690 589 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SNX16P57768 344 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 HPCAP84074 193 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 GUCY1A3Q02108 690 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 KRT17Q04695 432 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 WASHC5Q12768 1159 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CNPY1Q3B7I2 92 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 DUPD1Q68J44 220 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 RFX6Q8HWS3 928 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 ANKLE1Q8NAG6 615 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 GIPC2Q8TF65 315 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 IRGQQ8WZA9 623 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 TMEM121Q9BTD3 319 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 COLEC11Q9BWP8 271 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 DHX35Q9H5Z1 703 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 POPDC2Q9HBU9 364 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 TBCCD1Q9NVR7 557 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 EURLQ9NYK6 297 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 KLF15Q9UIH9 416 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 UTP11Q9Y3A2 253 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 COMMD3-BMI1R4GMX3 469 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SF3B1O75533 1304 aaKnown RBP eCLIP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 MYO7AQ13402 2215 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 E7EVH7 732 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CAPN9O14815 690 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CLASP2O75122 1294 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 LTFP02788 710 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CPB1P15086 417 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 EPHB4P54760 987 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 OTUD4Q01804 1114 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 ACAP1Q15027 740 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 PKN2Q16513 984 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 UBAP2Q5T6F2 1119 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 C1orf228Q6PIY5 440 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SPERTQ8NA61 448 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 ACTL9Q8TC94 416 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 AUTS2Q8WXX7 1259 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SLC2A13Q96QE2 648 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 NPY6RQ99463 290 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 OSER1Q9NX31 292 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 SNX10Q9Y5X0 201 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CDY1Q9Y6F8 540 aa11.03□□□□□ -0.64
LRRTM4-204ENST00000409884 CEP290O15078 2479 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 SYN3O14994 580 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 TP73O15350 636 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 HOXA2O43364 376 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 LIASO43766 372 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 DAB1O75553 588 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 TJP3O95049 919 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 SYN1P17600 705 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 PLTPP55058 493 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 GDF10P55107 478 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 DHX34Q14147 1143 aaKnown RBP11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 KRT81Q14533 505 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 KLC3Q6P597 504 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 ZDHHC24Q6UX98 284 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 MAP7D3Q8IWC1 876 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 FAM20CQ8IXL6 584 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 SIX5Q8N196 739 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 FBXO25Q8TCJ0 367 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 NT5C3BQ969T7 300 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 PWWP2AQ96N64 755 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 MCOLN1Q9GZU1 580 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 GBA3Q9H227 469 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 NMUR1Q9HB89 426 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 GRHL1Q9NZI5 618 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 SCOCQ9UIL1 159 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 AP4E1Q9UPM8 1137 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 ZNF711Q9Y462 761 aa11.02□□□□□ -0.65
LRRTM4-204ENST00000409884 NR2E3Q9Y5X4 410 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms