RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 DCP1BQ8IZD4 617 aaKnown RBP7.72□□□□□ -1.17
CXCR4-202ENST00000409817 CACNA2D3Q8IZS8 1091 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 ANKS4BQ8N8V4 417 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 SPATA13Q96N96 652 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 SMC6Q96SB8 1091 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 KCNK16Q96T55 309 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 PAAF1Q9BRP4 392 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 COLEC11Q9BWP8 271 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 KCNK9Q9NPC2 374 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 PIGVQ9NUD9 493 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 TMEM161AQ9NX61 479 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 CTNNAL1Q9UBT7 734 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 INPP5FQ9Y2H2 1132 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 RRP15Q9Y3B9 282 aaKnown RBP7.72□□□□□ -1.17
CXCR4-202ENST00000409817 FRMPD3Q5JV73 1810 aa7.72□□□□□ -1.17
CXCR4-202ENST00000409817 SRCAPQ6ZRS2 3230 aa7.71□□□□□ -1.17
CXCR4-202ENST00000409817 IQANK1A0A1B0GTG1 560 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 KBTBD13C9JR72 458 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 POC1B-GALNT4F8VUJ3 575 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 EIF1AYO14602 144 aaKnown RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 DCLK1O15075 740 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 TRPA1O75762 1119 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 FAM155BO75949 473 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 APRTP07741 180 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 USP17L7P0C7H9 530 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BMP1P13497 986 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 SELPP16109 830 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 RHOQP17081 205 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 KRT15P19012 456 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 DRD4P21917 467 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BDNFP23560 247 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 IGFBP6P24592 240 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 ELK3P41970 407 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 MSH2P43246 934 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BRCC3P46736 316 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 TPI1P60174 286 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 IL9RQ01113 521 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 SLC10A2Q12908 348 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 NME3Q13232 169 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BRMS1LQ5PSV4 323 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BSPRYQ5W0U4 402 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 HFE2Q6ZVN8 426 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BHLHA9Q7RTU4 235 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 BTLAQ7Z6A9 289 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 SPATA2LQ8IUW3 424 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 CKAP2Q8WWK9 683 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 VAT1Q99536 393 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 PRMT1Q99873 361 aaKnown RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 PLCD4Q9BRC7 762 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 NAT9Q9BTE0 207 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 OSBPL7Q9BZF2 842 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 OSBPL2Q9H1P3 480 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 WDCPQ9H6R7 721 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 ABCC13Q9NSE7 274 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 DDIT4Q9NX09 232 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.71□□□□□ -1.18
CXCR4-202ENST00000409817 SAMD15Q9P1V8 674 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 CACNG4Q9UBN1 327 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 TBK1Q9UHD2 729 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 KCNMB2Q9Y691 235 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 IKBKGQ9Y6K9 419 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 PTPRDP23468 1912 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 PATJQ8NI35 1801 aa7.71□□□□□ -1.18
CXCR4-202ENST00000409817 GOLGA6L7A0A1B0GV03 622 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ERI2A8K979 691 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CREB3O43889 395 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 FKTNO75072 461 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 UPP2O95045 317 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PARNO95453 639 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 AVPP01185 164 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 IGLV3-25P01717 112 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SSTR1P30872 391 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 GRK4P32298 578 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SMARCB1Q12824 385 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ITIH4Q14624 930 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PARP6Q2NL67 630 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ANKRD20A2Q5SQ80 823 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 LGSNQ5TDP6 509 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ANKRD20A1Q5TYW2 823 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ANKRD20A3Q5VUR7 823 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 RGS9BPQ6ZS82 235 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC8DQ7L1W4 858 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 GPRIN1Q7Z2K8 1008 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TRIM46Q7Z4K8 759 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PIGWQ7Z7B1 504 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 COLGALT2Q8IYK4 626 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PYROXD2Q8N2H3 581 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ARHGAP18Q8N392 663 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 OR10T2Q8NGX3 314 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CCDC110Q8TBZ0 833 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 FBF1Q8TES7 1133 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 NDRG1Q92597 394 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 GRAMD1AQ96CP6 724 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CABS1Q96KC9 395 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 MAGEB18Q96M61 343 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms