RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SPATA13Q96N96 652 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 DPY30Q9C005 99 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 ASTN1O14525 1302 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 RAD51BO15315 384 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 ITGALP20701 1170 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 SERPINH1P50454 418 aaKnown RBP13.61□□□□□ -0.23
SNED1-205ENST00000405547 NEK3P51956 506 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 ACTR8Q9H981 624 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 ENTPD7Q9NQZ7 604 aa13.61□□□□□ -0.23
SNED1-205ENST00000405547 FAM237BA0A1B0GVD1 139 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 RPL5P46777 297 aaKnown RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 XIAPP98170 497 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 RNF148Q8N7C7 305 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 OR56A4Q8NGH8 313 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 FIG4Q92562 907 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ACKR2O00590 384 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 RBL1P28749 1068 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PPATQ06203 517 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 DDX39BQ13838 428 aaKnown RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 PDK3Q15120 406 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 INAQ16352 499 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 NFE2Q16621 373 aaPredicted RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 CYP2R1Q6VVX0 501 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 RASGEF1CQ8N431 466 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ZSCAN18Q8TBC5 510 aaPredicted RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 FAM136AQ96C01 138 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 CAMKK2Q96RR4 588 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ACSS3Q9H6R3 686 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PCDHB7Q9Y5E2 793 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 TULP2O00295 520 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 EIF2S1P05198 315 aaKnown RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 AADATQ8N5Z0 425 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PTCD3Q96EY7 689 aaKnown RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 EMILIN2Q9BXX0 1053 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 EPHB6O15197 1021 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 SNAP91O60641 907 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PIGNO95427 931 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ZSCAN5DPP0CG00 497 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 TMEM132CQ8N3T6 1108 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 SPAG4Q9NPE6 437 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 DIABLOQ9NR28 239 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 MORF4L1Q9UBU8 362 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 AMPD1P23109 780 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 SLC16A1P53985 500 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 TSNQ15631 228 aaKnown RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 CACNA2D2Q9NY47 1150 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 STK39Q9UEW8 545 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ARHGAP23Q9P227 1491 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PSMD12O00232 456 aaPredicted RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 VAPBO95292 243 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 GLRA2P23416 452 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PIK3R1P27986 724 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 GTF2BQ00403 316 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 PNMA8BQ9ULN7 279 aaPredicted RBP13.6□□□□□ -0.23
SNED1-205ENST00000405547 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
SNED1-205ENST00000405547 DDTLA6NHG4 134 aaPredicted RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 PTGES3LE9PB15 166 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 RECQL5O94762 991 aaPredicted RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 LCA5LO95447 670 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 OAZ1P54368 228 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 ALDH6A1Q02252 535 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 TIMM50Q3ZCQ8 353 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 ULK2Q8IYT8 1036 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 ACTRT2Q8TDY3 377 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 JCADQ9P266 1359 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 FAM20BO75063 409 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 AAGABQ6PD74 315 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 SHC3Q92529 594 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 KCNK1O00180 336 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 MIB1Q86YT6 1006 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 PSTKQ8IV42 348 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 WDR60Q8WVS4 1066 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 C6orf62Q9GZU0 229 aaPredicted RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 MCM8Q9UJA3 840 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 H7C4K7 107 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 CETPP11597 493 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 NAA20P61599 178 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 CERS2Q96G23 380 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 REXO2Q9Y3B8 237 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 MT-CO1P00395 513 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 SLC2A4P14672 509 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 POU1F1P28069 291 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 OXCT1P55809 520 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 TRIM25Q14258 630 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms