RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CDH22Q9UJ99 828 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 SMAPO00193 183 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 KCNN4O15554 427 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 ITGA8P53708 1063 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 MLLT6P55198 1093 aaPredicted RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 COG7P83436 770 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 SLC10A2Q12908 348 aaPredicted RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 SPDYCQ5MJ68 293 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 RWDD4Q6NW29 188 aaKnown RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 LRRC31Q6UY01 552 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 LZTR1Q8N653 840 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 KREMEN2Q8NCW0 462 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 ADAM7Q9H2U9 754 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 USP29Q9HBJ7 922 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 TPX2Q9ULW0 747 aaKnown RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 SNX10Q9Y5X0 201 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 HS3ST4Q9Y661 456 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 STK10O94804 968 aaKnown RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 C8AP07357 584 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 GDF10P55107 478 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 GPS2Q13227 327 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 SLMAPQ14BN4 828 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 MORF4L2Q15014 288 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 RARS2Q5T160 578 aaKnown RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 HEATR6Q6AI08 1181 aaKnown RBP21.61■■□□□ 1.05
TPM1-208ENST00000404484 GLIS1Q8NBF1 620 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 PLD4Q96BZ4 506 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 CD320Q9NPF0 282 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 MAN1C1Q9NR34 630 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 SHOC2Q9UQ13 582 aa21.61■■□□□ 1.05
TPM1-208ENST00000404484 E9PAM4 449 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 SASH3O75995 380 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 ZSCAN5DPP0CG00 497 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 ETS1P14921 441 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 RBL1P28749 1068 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 KCTD19Q17RG1 926 aaPredicted RBP21.6■■□□□ 1.05
TPM1-208ENST00000404484 HIBCHQ6NVY1 386 aaPredicted RBP21.6■■□□□ 1.05
TPM1-208ENST00000404484 RHBDF2Q6PJF5 856 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 TMC5Q6UXY8 1006 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 TMC3Q7Z5M5 1100 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 C10orf88Q9H8K7 445 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 MFHAS1Q9Y4C4 1052 aa21.6■■□□□ 1.05
TPM1-208ENST00000404484 COCHO43405 550 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 PPFIA2O75334 1257 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 RPL22P35268 128 aaKnown RBP21.59■■□□□ 1.05
TPM1-208ENST00000404484 HARS2P49590 506 aaKnown RBP21.59■■□□□ 1.05
TPM1-208ENST00000404484 DHX9Q08211 1270 aaKnown RBP21.59■■□□□ 1.05
TPM1-208ENST00000404484 PRKD1Q15139 912 aaPredicted RBP21.59■■□□□ 1.05
TPM1-208ENST00000404484 PIK3R6Q5UE93 754 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 ALS2CLQ60I27 953 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 HOOK3Q86VS8 718 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 PPARGC1AQ9UBK2 798 aaKnown RBP21.59■■□□□ 1.05
TPM1-208ENST00000404484 HPCAL4Q9UM19 191 aa21.59■■□□□ 1.05
TPM1-208ENST00000404484 MTSS1O43312 755 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 MAP3K6O95382 1288 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 OAS1P00973 400 aaKnown RBP21.58■■□□□ 1.05
TPM1-208ENST00000404484 HMBSP08397 361 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 GGCXP38435 758 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 ZP2Q05996 745 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 ZNF33AQ06730 810 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 CBX2Q14781 532 aaPredicted RBP21.58■■□□□ 1.05
TPM1-208ENST00000404484 MS4A13Q5J8X5 152 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 CES5AQ6NT32 575 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 PRUNE1Q86TP1 453 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 ADHFE1Q8IWW8 467 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 PPIL6Q8IXY8 311 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 HTR3CQ8WXA8 447 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 GCNAQ96QF7 691 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 SFXN1Q9H9B4 322 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 PRKAG3Q9UGI9 489 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 DPP7Q9UHL4 492 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 NEU3Q9UQ49 428 aa21.58■■□□□ 1.05
TPM1-208ENST00000404484 C5orf60A6NFR6 353 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 SPDYE4A6NLX3 237 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 WASH4PA8MWX3 477 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 GCATO75600 419 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 RFPL2O75678 378 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 F11P03951 625 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 SLC11A2P49281 568 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 GALNT2Q10471 571 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 AUHQ13825 339 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 PPM1LQ5SGD2 360 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 ELMSAN1Q6PJG2 1045 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 AZIN2Q96A70 460 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 HDAC11Q96DB2 347 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 XPO7Q9UIA9 1087 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 TP73O15350 636 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 FGF19O95750 216 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 CDC25CP30307 473 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 AP1B1Q10567 949 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 CFAP58Q5T655 872 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 RNASEH2BQ5TBB1 312 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 GPR149Q86SP6 731 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 ZCCHC9Q8N567 271 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 RTL3Q8N8U3 475 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 CCNYQ8ND76 341 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 MRPS31Q92665 395 aaKnown RBP21.57■■□□□ 1.04
TPM1-208ENST00000404484 RUFY1Q96T51 708 aa21.57■■□□□ 1.04
TPM1-208ENST00000404484 TXLNGYQ9BZA5 131 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms