RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 FGF10O15520 208 aaPredicted RBP34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 CLDN11O75508 207 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 CHST9Q7L1S5 443 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 C12orf40Q86WS4 652 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 PCDH19Q8TAB3 1148 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 FAF2Q96CS3 445 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 HEBP1Q9NRV9 189 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 NDFIP2Q9NV92 336 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 ZNF212Q9UDV6 495 aa34.25■■■■□ 3.07
CSNK1E-204ENST00000403904 H0Y626 953 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 FANCGO15287 622 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 LUC7L3O95232 432 aaKnown RBP34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 PFKPQ01813 784 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 IER5LQ5T953 404 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 RNF43Q68DV7 783 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 MFN1Q8IWA4 741 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 WFDC5Q8TCV5 224 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 CHFRQ96EP1 664 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 RNF157Q96PX1 679 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 ETNK2Q9NVF9 386 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 TMEM248Q9NWD8 314 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 DNAI1Q9UI46 699 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 MIA3Q5JRA6 1907 aa34.24■■■■□ 3.07
CSNK1E-204ENST00000403904 KRT10P13645 584 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 CXCR5P32302 372 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 TAZQ16635 292 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 TFDP3Q5H9I0 405 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 VSIG1Q86XK7 387 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 RTL3Q8N8U3 475 aaKnown RBP34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 ZNF487B1APH4 448 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 CACNG3O60359 315 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 OR1E1P30953 314 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 ZNF177Q13360 481 aaPredicted RBP34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 CDH18Q13634 790 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 FSCBQ5H9T9 825 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 KAZNQ674X7 775 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 SYT10Q6XYQ8 523 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 XPO6Q96QU8 1125 aaKnown RBP34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 MAK16Q9BXY0 300 aaKnown RBP34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 MFHAS1Q9Y4C4 1052 aa34.23■■■■□ 3.07
CSNK1E-204ENST00000403904 SLC6A11P48066 632 aa34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 COPS2P61201 443 aa34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 NAIF1Q69YI7 327 aaPredicted RBP34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 ETFBKMTQ8IXQ9 262 aa34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 PQLC3Q8N755 202 aa34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 NAPGQ99747 312 aaPredicted RBP34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 HEMGNQ9BXL5 484 aa34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 DNAJC17Q9NVM6 304 aaKnown RBP34.22■■■■□ 3.07
CSNK1E-204ENST00000403904 hCG_1818297A0A087WSY0 165 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 WASH4PA8MWX3 477 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 DCLK1O15075 740 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 TRIM24O15164 1050 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 RFX6Q8HWS3 928 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 CCDC117Q8IWD4 279 aaPredicted RBP34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 CARD9Q9H257 536 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 MUTYHQ9UIF7 546 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 PIAS3Q9Y6X2 628 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 NUP205Q92621 2012 aa34.21■■■■□ 3.07
CSNK1E-204ENST00000403904 CTAGE9A4FU28 777 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 TULP3O75386 442 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 PPP2R5EQ16537 467 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 ASTLQ6HA08 431 aaPredicted RBP34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 CXorf57Q6NSI4 855 aaKnown RBP34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 OR52K2Q8NGK3 314 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 FIBINQ8TAL6 211 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 OSBPL8Q9BZF1 889 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 RETREG1Q9H6L5 497 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 FBXO10Q9UK96 956 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 TBC1D30Q9Y2I9 924 aa34.2■■■■□ 3.07
CSNK1E-204ENST00000403904 OPRD1P41143 372 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 CETN2P41208 172 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 MAPKAPK2P49137 400 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 ADCY2Q08462 1091 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 TMCO3Q6UWJ1 677 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 TRAF3IP1Q8TDR0 691 aaPredicted RBP34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 HERPUD2Q9BSE4 406 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 SPECC1L-ADORA2AF8WAN1 911 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 DYNLT1P63172 113 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 SLC44A4Q53GD3 710 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 NETO2Q8NC67 525 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 SLC2A11Q9BYW1 496 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 SNX12Q9UMY4 172 aa34.19■■■■□ 3.06
CSNK1E-204ENST00000403904 HLA-FP30511 346 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 CTHP32929 405 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 DGKGP49619 791 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 NUMBP49757 651 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 C6orf118Q5T5N4 469 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 SEL1L2Q5TEA6 688 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 NCBP2-AS2Q69YL0 99 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 SETD3Q86TU7 594 aaPredicted RBP34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 NPWQ8N729 165 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 C8orf33Q9H7E9 229 aaPredicted RBP34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 ABCB8Q9NUT2 735 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 DEC1Q9P2X7 70 aa34.18■■■■□ 3.06
CSNK1E-204ENST00000403904 KIAA1549LQ6ZVL6 1849 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 MUC3AQ02505 3323 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 CST8O60676 142 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 RHOCP08134 193 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 CISD3P0C7P0 127 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms