RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SYBUQ9NX95 663 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 MAPRE3Q9UPY8 281 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 XRN1Q8IZH2 1706 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 TREHO43280 583 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CNPP09543 421 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 CCND3P30281 292 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 CUL3Q13618 768 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 LONRF1Q17RB8 773 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 PTF1AQ7RTS3 328 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 TAS2R13Q9NYV9 303 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ATP6V1HQ9UI12 483 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ANKRD6Q9Y2G4 727 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 AHDC1Q5TGY3 1603 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 LRRC14BA6NHZ5 514 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 TLR5O60602 858 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 GLRA3O75311 464 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CATP04040 527 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 EPHX1P07099 455 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 SLC10A3P09131 477 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ITGA8P53708 1063 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CLNS1AP54105 237 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 DUSP4Q13115 394 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ANKS1BQ7Z6G8 1248 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 TIFAQ96CG3 184 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 MCRS1Q96EZ8 462 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 TRMT61BQ9BVS5 477 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 FAIM2Q9BWQ8 316 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 PSME2Q9UL46 239 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 PSMD10O75832 226 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ASLP04424 464 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 SLC47A2Q86VL8 602 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 PPP1R36Q96LQ0 422 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 TACO1Q9BSH4 297 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 PRRG4Q9BZD6 226 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 PJA2O43164 708 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CCNT2O60583 730 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 VPS4BO75351 444 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 DAB1O75553 588 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 CLK2P49760 499 aaKnown RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 CAP1Q01518 475 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 BRMS1LQ5PSV4 323 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 AFTPHQ6ULP2 937 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 OR14C36Q8NHC7 312 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 BRI3BPQ8WY22 251 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 OSBPL6Q9BZF3 934 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 RNPEPQ9H4A4 650 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ACTR5Q9H9F9 607 aaPredicted RBP8.11□□□□□ -1.11
USP47-203ENST00000399455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP47-203ENST00000399455 PCDHAC2Q9Y5I4 1007 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 HEBP2Q9Y5Z4 205 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 ALG6Q9Y672 507 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 SLIT2O94813 1529 aa8.11□□□□□ -1.11
USP47-203ENST00000399455 RNF103-CHMP3A0A140T963 221 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 A0A1W2PQ45 241 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 A0A1W2PQY0 241 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SGTAO43765 313 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ANXA6P08133 673 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CRABP2P29373 138 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PEX5P50542 639 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 DGKEP52429 567 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CAPSQ13938 189 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 DDR2Q16832 855 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 FAAH2Q6GMR7 532 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 MARK2Q7KZI7 788 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 IFNLR1Q8IU57 520 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 DIS3LQ8TF46 1054 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 ING5Q8WYH8 240 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CDT1Q9H211 546 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ACTR8Q9H981 624 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 NMRAL1Q9HBL8 299 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CYTH3O43739 400 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 OR10H2O60403 315 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 MAGEA4P43358 317 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 IL2P60568 153 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 USP39Q53GS9 565 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 C1orf146Q5VVC0 180 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SCUBE3Q8IX30 993 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ANKRD52Q8NB46 1076 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 AVL9Q8NBF6 648 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PRCCQ92733 491 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 C12orf42Q96LP6 360 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 COILP38432 576 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 RANBP1P43487 201 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PPP2R2AP63151 447 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 CBWD6Q4V339 395 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 IL12RB2Q99665 862 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms