RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 NUP58Q9BVL2 599 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 GPR174Q9BXC1 333 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
VCX3A-202ENST00000398729 STK33Q9BYT3 514 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 COX16Q9P0S2 106 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 KIAA1522Q9P206 1035 aaPredicted RBP13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SUN2Q9UH99 717 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SLC6A14Q9UN76 642 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 LHX6Q9UPM6 363 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 APC2O95996 2303 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 ACACAQ13085 2346 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 BPTFQ12830 3046 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 MEI4A8MW99 385 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 DAB1O75553 588 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 IGLV3-19P01714 112 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 SERPINF2P08697 491 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 GNSP15586 552 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
VCX3A-202ENST00000398729 NOS2P35228 1153 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 CSKP41240 450 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 MAPK8P45983 427 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
VCX3A-202ENST00000398729 SEMA3BQ13214 749 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 FSCBQ5H9T9 825 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 PITRM1Q5JRX3 1037 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 CDKAL1Q5VV42 579 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
VCX3A-202ENST00000398729 CADM4Q8NFZ8 388 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 TTC17Q96AE7 1141 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 VPS16Q9H269 839 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 PRSS16Q9NQE7 514 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 FSCN3Q9NQT6 498 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 ANO10Q9NW15 660 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 RRN3Q9NYV6 651 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 SUSD2Q9UGT4 822 aa13.86□□□□□ -0.19
VCX3A-202ENST00000398729 INTS6Q9UL03 887 aaKnown RBP13.86□□□□□ -0.19
VCX3A-202ENST00000398729 UPK3BL1B0FP48 263 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 UPK3BL2E5RIL1 263 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 F8VZ95 297 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 M0QYT0 321 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 SYPP08247 313 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 MATKP42679 507 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 SIM1P81133 766 aaPredicted RBP13.85□□□□□ -0.19
VCX3A-202ENST00000398729 ZBTB16Q05516 673 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 NME3Q13232 169 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 KRT31Q15323 416 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 RABGAP1LQ5R372 815 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 TTC39BQ5VTQ0 682 aaPredicted RBP13.85□□□□□ -0.19
VCX3A-202ENST00000398729 TAF3Q5VWG9 929 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 ERICH1Q86X53 443 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 MSANTD4Q8NCY6 345 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 C18orf8Q96DM3 657 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
VCX3A-202ENST00000398729 GTPBP2Q9BX10 602 aaKnown RBP13.85□□□□□ -0.19
VCX3A-202ENST00000398729 CAPN10Q9HC96 672 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.85□□□□□ -0.19
VCX3A-202ENST00000398729 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
VCX3A-202ENST00000398729 KNL1Q8NG31 2342 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 TCAF2A6NFQ2 919 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 LSM8O95777 96 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 MBD3O95983 291 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 DNTTP04053 509 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 SRPRAP08240 638 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 C7P10643 843 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 MAOBP27338 520 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 SCNN1AP37088 669 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 GABRB2P47870 512 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 OXCT1P55809 520 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 ECT2LQ008S8 904 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 SLC12A1Q13621 1099 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 STX1AQ16623 288 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 PLEKHG6Q3KR16 790 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 TTC31Q49AM3 519 aaPredicted RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 ZNF776Q68DI1 518 aaPredicted RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 NOP9Q86U38 636 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
VCX3A-202ENST00000398729 CHCHD4Q8N4Q1 142 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 KDM1BQ8NB78 822 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 MYO19Q96H55 970 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 NPY6RQ99463 290 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 PCED1AQ9H1Q7 454 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 GANQ9H2C0 597 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 SLC32A1Q9H598 525 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 ADAMTS9Q9P2N4 1935 aa13.84□□□□□ -0.19
VCX3A-202ENST00000398729 METTL12A8MUP2 240 aa13.83□□□□□ -0.2
VCX3A-202ENST00000398729 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms