RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 METTL3Q86U44 580 aaKnown RBP17.23■□□□□ 0.35
APTR-201ENST00000398043 C11orf74Q86VG3 221 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 KIAA2013Q8IYS2 634 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 CD93Q9NPY3 652 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 IFNKQ9P0W0 207 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 KIAA1522Q9P206 1035 aaPredicted RBP17.23■□□□□ 0.35
APTR-201ENST00000398043 VANGL2Q9ULK5 521 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 SNX10Q9Y5X0 201 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 DOCK9Q9BZ29 2069 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 IGHV1OR15-9A0A0B4J2B8 117 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 H0Y626 953 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 DDX3XO00571 662 aaKnown RBP eCLIP17.22■□□□□ 0.357e-9■■■■□ 20
APTR-201ENST00000398043 ATP5BP06576 529 aaKnown RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 KRT3P12035 628 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 HLA-EP13747 358 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 PDGFRAP16234 1089 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 TNFAIP3P21580 790 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 CTSOP43234 321 aaPredicted RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 HDAC4P56524 1084 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 ATP11AP98196 1134 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 SLC12A1Q13621 1099 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 HGSNATQ68CP4 663 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 WDR59Q6PJI9 974 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 SERPINA13PQ6UXR4 307 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 SND1Q7KZF4 910 aaKnown RBP eCLIP17.22■□□□□ 0.35
APTR-201ENST00000398043 STRADAQ7RTN6 431 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 FAM131BQ86XD5 332 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 GPR161Q8N6U8 529 aaKnown RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 VCPIP1Q96JH7 1222 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 RPRD1AQ96P16 312 aaPredicted RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 HINFPQ9BQA5 517 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 SIK2Q9H0K1 926 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 SEPT11Q9NVA2 429 aaKnown RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 USP36Q9P275 1121 aaKnown RBP17.22■□□□□ 0.35
APTR-201ENST00000398043 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 PLA2G4CQ9UP65 541 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 TBC1D30Q9Y2I9 924 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 OR51B4Q9Y5P0 310 aa17.22■□□□□ 0.35
APTR-201ENST00000398043 CNTN5O94779 1100 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 RHOBTB1O94844 696 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 ASLP04424 464 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 EPHX1P07099 455 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 GZMAP12544 262 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 RRM1P23921 792 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 SDC4P31431 198 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 RPL7AP62424 266 aaKnown RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 STARD3Q14849 445 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 CSRP2Q16527 193 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 FNDC3BQ53EP0 1204 aaKnown RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 ALFQ53S48 1182 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 SYN2Q92777 582 aaPredicted RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
APTR-201ENST00000398043 ARRDC1-AS1Q9H2J1 176 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 TSPY26PQ9H489 355 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 PRSS16Q9NQE7 514 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 SEMA4GQ9NTN9 838 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 CAPN11Q9UMQ6 739 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 ERVW-1Q9UQF0 538 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 PCDHGA5Q9Y5G8 931 aa17.21■□□□□ 0.35
APTR-201ENST00000398043 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.34
APTR-201ENST00000398043 BCLAF3A2AJT9 711 aaKnown RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 ZNF217O75362 1048 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 CLDN11O75508 207 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 IGLV3-19P01714 112 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 GYPCP04921 128 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 SRPRAP08240 638 aaKnown RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 SKILP12757 684 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 ADRA1BP35368 520 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 VASPP50552 380 aaPredicted RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 CDH4P55283 916 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 NRG1Q02297 640 aaPredicted RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 KLHL30Q0D2K2 578 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 BYSLQ13895 437 aaKnown RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 ELF2Q15723 593 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 MANEALQ5VSG8 457 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 OR2T3Q8NH03 318 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 SPACA7Q96KW9 195 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 SELENOOQ9BVL4 669 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 PRDM16Q9HAZ2 1276 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 ITM2CQ9NQX7 267 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 NEU3Q9UQ49 428 aa17.2■□□□□ 0.34
APTR-201ENST00000398043 ASCC3Q8N3C0 2202 aaKnown RBP17.2■□□□□ 0.34
APTR-201ENST00000398043 KNL1Q8NG31 2342 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 TP53BP1Q12888 1972 aaPredicted RBP17.19■□□□□ 0.34
APTR-201ENST00000398043 PCDH15Q96QU1 1955 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 E9PAM4 449 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 SYNCRIPO60506 623 aaKnown RBP17.19■□□□□ 0.34
APTR-201ENST00000398043 ZNF806P0C7X5 589 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms