RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CNOT10Q9H9A5 744 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC40A1Q9NP59 571 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DDX28Q9NUL7 540 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 UBA2Q9UBT2 640 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PACSIN2Q9UNF0 486 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KIAA1024Q9UPX6 916 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DERAQ9Y315 318 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ATP8B3O60423 1300 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 MAST2Q6P0Q8 1798 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZSCAN5BA6NJL1 495 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 RFPL1O75677 317 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ASNSP08243 561 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TFPTP0C1Z6 253 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF33BQ06732 778 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 MYO1EQ12965 1108 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZCWPW2Q504Y3 356 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DCAF8Q5TAQ9 597 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KIAA0319LQ8IZA0 1049 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TCAIMQ8N3R3 496 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 POC1BQ8TC44 478 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 METTL21AQ8WXB1 218 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PMEPA1Q969W9 287 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 RAB7BQ96AH8 199 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 C7orf34Q96L11 122 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM192AQ9GZU8 254 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SP140LQ9H930 580 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 AMFRQ9UKV5 643 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 L3MBTL1Q9Y468 752 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PCDHGA1Q9Y5H4 931 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FRMPD2Q68DX3 1309 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PITPNM2Q9BZ72 1349 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 DNAH12Q6ZR08 3092 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 MOXD2PA6NHM9 499 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 B4E171 279 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 DDX39AO00148 427 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PRPSAP2O60256 369 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GSTA2P09210 222 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 HSD17B3P37058 310 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 RGS7P49802 495 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 RAB15P59190 212 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 FOXO1Q12778 655 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 RIPK1Q13546 671 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 ADRM1Q16186 407 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 SPATS1Q496A3 300 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CRTC2Q53ET0 693 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 TMC5Q6UXY8 1006 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 C4orf22Q6V702 233 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PRR23CQ6ZRP0 262 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 TXNRD3Q86VQ6 643 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 DNAJC19Q96DA6 116 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CHMP6Q96FZ7 201 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 FBXL18Q96ME1 805 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 TRIM2Q9C040 744 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 VCXQ9H320 206 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PIDD1Q9HB75 910 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CD300AQ9UGN4 299 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 AFF4Q9UHB7 1163 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NOC2LQ9Y3T9 749 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PSMD11O00231 422 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NOL3O60936 208 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NOL4O94818 638 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 ABLIM3O94929 683 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CPB1P15086 417 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 BMI1P35226 326 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GRK6P43250 576 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NLRP11P59045 1033 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GIT2Q14161 759 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CST9Q5W186 159 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 ANKMY2Q8IV38 441 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GRAMD1AQ96CP6 724 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 CYFIP2Q96F07 1278 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 OPALINQ96PE5 141 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NOP53Q9NZM5 478 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 LIMD1Q9UGP4 676 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 BAIAP2L1Q9UHR4 511 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GAB2Q9UQC2 676 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PIAS3Q9Y6X2 628 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 COMMD3-BMI1R4GMX3 469 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 DPPA5A6NC42 116 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 H0YCG3 227 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NDUFS8O00217 210 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 BTN3A1O00481 513 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 GPR37L1O60883 481 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 IFNB1P01574 187 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 NFICP08651 508 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 UCHL3P15374 230 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 ABATP80404 500 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 PTK2Q05397 1052 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM160B2Q86V87 743 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 LONP2Q86WA8 852 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 USP13Q92995 863 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 LENG1Q96BZ8 264 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC10A4Q96EP9 437 aa6.75□□□□□ -1.33
TM9SF4-202ENST00000398022 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms