RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ANKS1BQ7Z6G8 1248 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 TFAP2DQ7Z6R9 452 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 RFX6Q8HWS3 928 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 FAF2Q96CS3 445 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 ARHGEF4Q9NR80 690 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 H0Y626 953 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 LUC7L3O95232 432 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 ERCC2P18074 760 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 CASQ1P31415 396 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF177Q13360 481 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 TAZQ16635 292 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 TFDP3Q5H9I0 405 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 SEL1L2Q5TEA6 688 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 KAZNQ674X7 775 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 AADACL2Q6P093 401 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 NLRP14Q86W24 1093 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 RNF135Q8IUD6 432 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 CCDC117Q8IWD4 279 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 NAT16Q8N8M0 369 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 PCDH19Q8TAB3 1148 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 DNASE1L2Q92874 299 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 RNF157Q96PX1 679 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 XPO6Q96QU8 1125 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 TRPV5Q9NQA5 729 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 TMEM248Q9NWD8 314 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 SORCS3Q9UPU3 1222 aa24.28■■□□□ 1.48
TSPAN4-203ENST00000397397 WASH4PA8MWX3 477 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 KRT10P13645 584 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 CXCR5P32302 372 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 GJA4P35212 333 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 PFKPQ01813 784 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 PPP2R5EQ16537 467 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 MFN1Q8IWA4 741 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 RTL3Q8N8U3 475 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 CARD9Q9H257 536 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 RETREG1Q9H6L5 497 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 SLC2A4RGQ9NR83 387 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 COL4A3Q01955 1670 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 hCG_1818297A0A087WSY0 165 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 OR1E1P30953 314 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 CDH18Q13634 790 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 GAB4Q2WGN9 574 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 RNF43Q68DV7 783 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 PQLC3Q8N755 202 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 HEMGNQ9BXL5 484 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 OSBPL8Q9BZF1 889 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 ETNK2Q9NVF9 386 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF212Q9UDV6 495 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 CLEC4EQ9ULY5 219 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 SNX12Q9UMY4 172 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 DUSP12Q9UNI6 340 aa24.27■■□□□ 1.48
TSPAN4-203ENST00000397397 COL4A2P08572 1712 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 DCLK1O15075 740 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 FANCGO15287 622 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 CACNG3O60359 315 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 PTPN7P35236 360 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 MAPKAPK2P49137 400 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 TMCO3Q6UWJ1 677 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 PBKQ96KB5 322 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 NDFIP2Q9NV92 336 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 DONSONQ9NYP3 566 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 MFHAS1Q9Y4C4 1052 aa24.26■■□□□ 1.47
TSPAN4-203ENST00000397397 KIF2AO00139 706 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 APOL1O14791 398 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 TUBB4AP04350 444 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 SOX9P48436 509 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 DYNLT1P63172 113 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 TFDP2Q14188 446 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 C12orf40Q86WS4 652 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 FIBINQ8TAL6 211 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 WFDC5Q8TCV5 224 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 OSBPL9Q96SU4 736 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 SLC2A11Q9BYW1 496 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 EPHX3Q9H6B9 360 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 HEBP1Q9NRV9 189 aa24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 DNAJC17Q9NVM6 304 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-203ENST00000397397 ESPNB1AK53 854 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 CEP104O60308 925 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 RHOCP08134 193 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 SLC6A11P48066 632 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 AMPD2Q01433 879 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 FSCBQ5H9T9 825 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 C6orf118Q5T5N4 469 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 PAPD7Q5XG87 772 aaKnown RBP24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 SETD3Q86TU7 594 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 ETFBKMTQ8IXQ9 262 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 ZNF557Q8N988 423 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 PRDM16Q9HAZ2 1276 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 TBC1D30Q9Y2I9 924 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 MIA3Q5JRA6 1907 aa24.24■■□□□ 1.47
TSPAN4-203ENST00000397397 CST8O60676 142 aa24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 TULP3O75386 442 aa24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 ZFXP17010 805 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 TCP1P17987 556 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 DGKGP49619 791 aa24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 NCBP2-AS2Q69YL0 99 aa24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 SLC9A4Q6AI14 798 aa24.23■■□□□ 1.47
TSPAN4-203ENST00000397397 ASTLQ6HA08 431 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms