RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ITPRIPL1Q6GPH6 555 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 BNC2Q6ZN30 1099 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 CDR2LQ86X02 465 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 PQLC1Q8N2U9 271 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 POU5F2Q8N7G0 328 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 KYQ8NBH2 561 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 PHC3Q8NDX5 983 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 ADCY4Q8NFM4 1077 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 NAT14Q8WUY8 206 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.763e-7■■■□□ 18.3
UBE2D3-208ENST00000394803 MINDY3Q9H8M7 445 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 COG4Q9H9E3 785 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 CYP4F11Q9HBI6 524 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 TMEM216Q9P0N5 145 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 FZD10Q9ULW2 581 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 RAP2CQ9Y3L5 183 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 PLXNA1Q9UIW2 1896 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 A0A087WZ62 844 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 TXNDC9O14530 226 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ZNF195O14628 629 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 DCXO43602 365 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 DAB1O75553 588 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 TNFAIP8O95379 198 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 PNPLA4P41247 253 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 RPL5P46777 297 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 KPNA2P52292 529 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 AQP4P55087 323 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 PRKAA1Q13131 559 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 LSAMPQ13449 338 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 KCTD2Q14681 263 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 PAFAH1B3Q15102 231 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.769e-7■□□□□ 10.8
UBE2D3-208ENST00000394803 CNGA3Q16281 694 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 SLC25A52Q3SY17 297 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 TMEM259Q4ZIN3 620 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 LRRC23Q53EV4 343 aaPredicted RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 RAB6CQ53S08 254 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 SFT2D3Q587I9 215 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ARHGAP22Q7Z5H3 698 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ACOT1Q86TX2 421 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 RSPH3Q86UC2 560 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 TDRD5Q8NAT2 981 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 CCDC124Q96CT7 223 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 VAT1Q99536 393 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 MRPS26Q9BYN8 205 aaKnown RBP10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 RAB6CQ9H0N0 254 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 SYBUQ9NX95 663 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 PTTG2Q9NZH5 202 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 EPS15L1Q9UBC2 864 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 ADAMTS6Q9UKP5 1117 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 TRHDEQ9UKU6 1024 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 SNX9Q9Y5X1 595 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 USP3Q9Y6I4 520 aa10.27□□□□□ -0.76
UBE2D3-208ENST00000394803 CITO14578 2027 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 ARHGAP10A1A4S6 786 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 ASB14A6NK59 587 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 HDAC3O15379 428 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 AP1G2O75843 785 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 PDE5AO76074 875 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 MAP3K6O95382 1288 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 EGFRP00533 1210 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 PENKP01210 267 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 COL6A2P12110 1019 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 ARF4P18085 180 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 GLDCP23378 1020 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 PEX2P28328 305 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 SULT1E1P49888 294 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 FOLH1Q04609 750 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 LAMB3Q13751 1172 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 LAMC2Q13753 1193 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 SEL1L3Q68CR1 1132 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 FRMD7Q6ZUT3 714 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 EEPD1Q7L9B9 569 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 MAVSQ7Z434 540 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 CPSF7Q8N684 471 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 C12orf29Q8N999 325 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 OR6B3Q8NGW1 331 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 LZICQ8WZA0 190 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 P2RY11Q96G91 374 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 TNIP3Q96KP6 325 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 ZNF560Q96MR9 790 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 SLC9A7Q96T83 725 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 DDX50Q9BQ39 737 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 MTMR10Q9NXD2 777 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 TLK1Q9UKI8 766 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 CNOT11Q9UKZ1 510 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 TMCO1Q9UM00 188 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 PADI4Q9UM07 663 aa10.27□□□□□ -0.77
UBE2D3-208ENST00000394803 A0A096LPK6 155 aa10.26□□□□□ -0.77
UBE2D3-208ENST00000394803 C15orf38-AP3S2A0A0A6YYH1 394 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms