RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 KHDRBS3O75525 346 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 COX4I1P13073 169 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 POLR2EP19388 210 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 ETFBP38117 255 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 GP5P40197 560 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 SCRN3Q0VDG4 424 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 TMEM143Q96AN5 459 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 HPDLQ96IR7 371 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 CINPQ9BW66 212 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 FAM237BA0A1B0GVD1 139 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 NUP205Q92621 2012 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 ASMTLO95671 621 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 SLC2A4P14672 509 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 HIPK1Q86Z02 1210 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 WDCPQ9H6R7 721 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 KBTBD13C9JR72 458 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 VPS72Q15906 364 aa12.65□□□□□ -0.38
SRGAP3-202ENST00000383836 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 NPY2RP49146 381 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 XKR3Q5GH77 459 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 PEG10Q86TG7 708 aaKnown RBP12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 KCNMB4Q86W47 210 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 ZNF668Q96K58 619 aaPredicted RBP12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 MID1IP1Q9NPA3 183 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.39
SRGAP3-202ENST00000383836 NR2C2P49116 596 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 RAB15P59190 212 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 DDX39BQ13838 428 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 UBE2Q1Q7Z7E8 422 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 MIEF1Q9NQG6 463 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 MYBL2P10244 700 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 CAPGP40121 348 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 SQLEQ14534 574 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 ZCCHC8Q6NZY4 707 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 SLFN11Q7Z7L1 901 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 CDK20Q8IZL9 346 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 NACC2Q96BF6 587 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 CMTM6Q9NX76 183 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 ERGIC3Q9Y282 383 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 GMPPBQ9Y5P6 360 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 ZIK1Q3SY52 487 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 SV2CQ496J9 727 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 RAB43Q86YS6 212 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 SYNPO2Q9UMS6 1093 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 MAP3K6O95382 1288 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 GLP2RO95838 553 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 DSG3P32926 999 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 RPS6KB2Q9UBS0 482 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 TRIM17Q9Y577 477 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 WDR27A2RRH5 827 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 PSMD12O00232 456 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 NCAM2O15394 837 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 CPB1P15086 417 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 RRM1P23921 792 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 EMC2Q15006 297 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 ACTL9Q8TC94 416 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 IKZF3Q9UKT9 509 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 GPC6Q9Y625 555 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 VEPH1Q14D04 833 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 FGD3Q5JSP0 725 aa12.64□□□□□ -0.39
SRGAP3-202ENST00000383836 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 MT-CO1P00395 513 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CDC42P60953 191 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ARCQ7LC44 396 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 LRRC20Q8TCA0 184 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 PRPF19Q9UMS4 504 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 A0A087X1B8 175 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ERI2A8K979 691 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CYBBP04839 570 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 TNFAIP8L3Q5GJ75 292 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 WDR48Q8TAF3 677 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CCNB1IP1Q9NPC3 277 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 A0A096LPK6 155 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms