RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TBC1D3EA0A087X179 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3KA0A087X1G2 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 EDDM13A0A1B0GTR0 161 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 A0A1W2PR77 199 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3FA6NER0 549 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3LB9A6J9 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 M0QYV0 167 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 CETN3O15182 167 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 ATXN7O15265 892 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 YKT6O15498 198 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 IRAK2O43187 625 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 SDC3O75056 442 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 MOCS3O95396 460 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 CALCAP01258 141 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 IL1BP01584 269 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 IGLV3-27P01718 113 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 LTFP02788 710 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3HP0C7X1 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 C7P10643 843 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 VDRP11473 427 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 MAT2AP31153 395 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 NDUFA8P51970 172 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 ADPRHP54922 357 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 ZCWPW2Q504Y3 356 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 MPP7Q5T2T1 576 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3GQ6DHY5 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3CQ6IPX1 549 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 PMF1Q6P1K2 205 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 SND1Q7KZF4 910 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TBC1D3Q8IZP1 549 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 ZNF557Q8N988 423 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 KCTD13Q8WZ19 329 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 FAXDC2Q96IV6 333 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 LMLNQ96KR4 655 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 SPATA32Q96LK8 384 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 SLCO3A1Q9UIG8 710 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 FZD4Q9ULV1 537 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 HPSEQ9Y251 543 aa18.42■□□□□ 0.54
PDLIM4-202ENST00000379018 TLR4O00206 839 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 BRINP1O60477 761 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 C1SP09871 688 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 STK19P49842 368 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 CCR5P51681 352 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 NXPH1P58417 271 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 POM121L1PQ3SYA9 428 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 FBXL19Q6PCT2 694 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 TMEM270Q6UE05 265 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 TFAP2BQ92481 460 aa18.41■□□□□ 0.54
PDLIM4-202ENST00000379018 DOCK9Q9BZ29 2069 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 GABBR2O75899 941 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 LUC7L3O95232 432 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 CDK4P11802 303 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 VAV1P15498 845 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 GOT1P17174 413 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 GLDCP23378 1020 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 BRD2P25440 801 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 METAP1P53582 386 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 CXADRP78310 365 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 ECT2LQ008S8 904 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 EDRF1Q3B7T1 1238 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 DCAF6Q58WW2 860 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 KDM7AQ6ZMT4 941 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 APCDD1Q8J025 514 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 LGI2Q8N0V4 545 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 DQX1Q8TE96 717 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 COL26A1Q96A83 441 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 FAM149B1Q96BN6 582 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 NAF1Q96HR8 494 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 FCRL2Q96LA5 508 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 NRSN2Q9GZP1 204 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 ADAMTS1Q9UHI8 967 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 XPO7Q9UIA9 1087 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 PCDHB4Q9Y5E5 795 aa18.4■□□□□ 0.54
PDLIM4-202ENST00000379018 TARSL2A2RTX5 802 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 ADH1BP00325 375 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 MZF1P28698 734 aaPredicted RBP18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 PKDCCQ504Y2 493 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 MS4A13Q5J8X5 152 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 RAP1GAP2Q684P5 730 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 KRBA2Q6ZNG9 492 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 CHSY1Q86X52 802 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 IRGQQ8WZA9 623 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 FAM129BQ96TA1 746 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 MYOCQ99972 504 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 CLCA2Q9UQC9 943 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 CA5BQ9Y2D0 317 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 KALRNO60229 2985 aa18.39■□□□□ 0.53
PDLIM4-202ENST00000379018 TK2O00142 265 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 RTN2O75298 545 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 SRPRAP08240 638 aaKnown RBP18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 PLA2G2AP14555 144 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 CKMT2P17540 419 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 C5AR1P21730 350 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 NUCB2P80303 420 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 RTP5Q14D33 572 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms