RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 GRTP1Q5TC63 336 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 C6orf163Q5TEZ5 329 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 RINLQ6ZS11 566 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 RFX8Q6ZV50 586 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 OSTM1Q86WC4 334 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 RASSF3Q86WH2 238 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LMNTD2Q8IXW0 634 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PYROXD2Q8N2H3 581 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 STMN2Q93045 179 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LRCH3Q96II8 777 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LGMNQ99538 433 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CPNE1Q99829 537 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LRRC40Q9H9A6 602 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 SLC38A7Q9NVC3 462 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 TAS2R1Q9NYW7 299 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PDCD11Q14690 1871 aaKnown RBP14.29□□□□□ -0.12
HMGCL-203ENST00000374490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.29□□□□□ -0.12
HMGCL-203ENST00000374490 CCDC195A0A1B0GUA6 201 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 F8W8V4 182 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 M0QYT0 321 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 AP3B1O00203 1094 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 GABRDO14764 452 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 DCLK1O15075 740 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 TREHO43280 583 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 PLIN3O60664 434 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 CIB2O75838 187 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 PGK1P00558 417 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 SERPINE1P05121 402 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 FAM200BP0CF97 657 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MYL4P12829 197 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ACADSP16219 412 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MX2P20592 715 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 PGM1P36871 562 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 GRIA1P42261 906 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
HMGCL-203ENST00000374490 CDK7P50613 346 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 AQP5P55064 265 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 SESN2P58004 480 aaPredicted RBP14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ADAM17P78536 824 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ITPRIPL1Q6GPH6 555 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
HMGCL-203ENST00000374490 TMEM86AQ8N2M4 240 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 TTC8Q8TAM2 541 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 KCNV2Q8TDN2 545 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 PPP4R1Q8TF05 950 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 LRRN4Q8WUT4 740 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ISL2Q96A47 359 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MED10Q9BTT4 135 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 KLK14Q9P0G3 267 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 ZFATQ9P243 1243 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 MFHAS1Q9Y4C4 1052 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 IPPQ9Y573 584 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 SCN1AP35498 2009 aa14.29□□□□□ -0.12
HMGCL-203ENST00000374490 CYB561D2O14569 222 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 TPP1O14773 563 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 KIF1CO43896 1103 aaKnown RBP14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ENTPD5O75356 428 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 KLHL2O95198 593 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 F9P00740 461 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ITGA2BP08514 1039 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 SYN1P17600 705 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ATP6V1C1P21283 382 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 DNAJB2P25686 324 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 PSMB4P28070 264 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ADRA1BP35368 520 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 VHLP40337 213 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 PDE1BQ01064 536 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ARL13BQ3SXY8 428 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 N4BP2L1Q5TBK1 243 aaPredicted RBP14.28□□□□□ -0.12
HMGCL-203ENST00000374490 MBLAC2Q68D91 279 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 ZNF567Q8N184 647 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 SREK1Q8WXA9 508 aaKnown RBP14.28□□□□□ -0.12
HMGCL-203ENST00000374490 MIEF2Q96C03 454 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 PGBD4Q96DM1 585 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 PGAP3Q96FM1 320 aaPredicted RBP14.28□□□□□ -0.12
HMGCL-203ENST00000374490 VAT1Q99536 393 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 PRDM12Q9H4Q4 367 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 CNGB3Q9NQW8 809 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 MID2Q9UJV3 735 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 TRHDEQ9UKU6 1024 aa14.28□□□□□ -0.12
HMGCL-203ENST00000374490 TRIP12Q14669 1992 aaPredicted RBP14.28□□□□□ -0.12
HMGCL-203ENST00000374490 MAGEB16A2A368 324 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 B2RBV5 119 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PSMD3O43242 534 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 CREB3O43889 395 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PSMG1O95456 288 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 AP2A1O95782 977 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 ALDOAP04075 364 aaKnown RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 AOC1P19801 751 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SPRP35270 261 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 MAGEA10P43363 369 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms