RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SERPINA6P08185 405 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 USP17L7P0C7H9 530 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 TYK2P29597 1187 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 KDSRQ06136 332 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 IRF5Q13568 498 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 RCN1Q15293 331 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 TEDDM1Q5T9Z0 273 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 WDR60Q8WVS4 1066 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 ZNF669Q96BR6 464 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-206ENST00000373571 PCED1BQ96HM7 432 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 ZNF778Q96MU6 729 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 CNGB3Q9NQW8 809 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-206ENST00000373571 RAD54BQ9Y620 910 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 MYBPHLA2RUH7 354 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 C9IYK1 514 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 ZNF189O75820 626 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-206ENST00000373571 KRT36O76013 467 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 PROCP04070 461 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 LHX1P48742 406 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 GJA9P57773 515 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
HDAC8-206ENST00000373571 TBCCQ15814 346 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 CCDC6Q16204 474 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 INSCQ1MX18 579 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
HDAC8-206ENST00000373571 NPWQ8N729 165 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 ZMIZ2Q8NF64 920 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 FBXO27Q8NI29 283 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 DDIT4Q9NX09 232 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 STOML1Q9UBI4 398 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 FBXW11Q9UKB1 542 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 VANGL2Q9ULK5 521 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 DOCK3Q8IZD9 2030 aa17.12■□□□□ 0.33
HDAC8-206ENST00000373571 PRR5-ARHGAP8B1AHC4 643 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 NCAM2O15394 837 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 SERPINE1P05121 402 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 PRKCGP05129 697 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 GNAT1P11488 350 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 SESN3P58005 492 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 ARHGAP8P85298 464 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 UBAP2LQ14157 1087 aaKnown RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CCL14Q16627 93 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 ARL13BQ3SXY8 428 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 DNAAF3Q8N9W5 541 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 RBM15BQ8NDT2 890 aaKnown RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 SNX15Q9NRS6 342 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 TMEM30AQ9NV96 361 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 TMEM216Q9P0N5 145 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 ZBTB24O43167 697 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 MAGEC1O60732 1142 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 LUC7L3O95232 432 aaKnown RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 PSMG1O95456 288 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 LTFP02788 710 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CDC25CP30307 473 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 HCAR3P49019 387 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CLCNKBP51801 687 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 CMC1Q7Z7K0 106 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 STMN2Q93045 179 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 GAD1Q99259 594 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 RBBP8Q99708 897 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 COPG2Q9UBF2 871 aa17.11■□□□□ 0.33
HDAC8-206ENST00000373571 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.11■□□□□ 0.33
HDAC8-206ENST00000373571 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 GMPRP36959 345 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 RAP1GDS1P52306 607 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 STRA8Q7Z7C7 330 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 DCLK2Q8N568 766 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 MIEF2Q96C03 454 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 HDAC11Q96DB2 347 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 GBA3Q9H227 469 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 CASS4Q9NQ75 786 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
HDAC8-206ENST00000373571 USP1O94782 785 aa17.09■□□□□ 0.33
HDAC8-206ENST00000373571 THP07101 528 aa17.09■□□□□ 0.33
HDAC8-206ENST00000373571 GRK2P25098 689 aa17.09■□□□□ 0.33
HDAC8-206ENST00000373571 HOXC8P31273 242 aa17.09■□□□□ 0.33
HDAC8-206ENST00000373571 CD68P34810 354 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-206ENST00000373571 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-206ENST00000373571 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms