RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 DHRS4L2Q6PKH6 230 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 PLEKHG4BQ96PX9 1271 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 EIF2B3Q9NR50 452 aaKnown RBP17.96■□□□□ 0.47
CHUK-201ENST00000370397 G3BP2Q9UN86 482 aaKnown RBP17.96■□□□□ 0.47
CHUK-201ENST00000370397 CITO14578 2027 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 CPA3P15088 417 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 ATXN1P54253 815 aaKnown RBP17.96■□□□□ 0.47
CHUK-201ENST00000370397 MAP7D3Q8IWC1 876 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 CNBD2Q96M20 576 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 HES2Q9Y543 173 aa17.96■□□□□ 0.47
CHUK-201ENST00000370397 GRID2O43424 1007 aa17.96■□□□□ 0.46
CHUK-201ENST00000370397 BCAS2O75934 225 aaPredicted RBP17.96■□□□□ 0.46
CHUK-201ENST00000370397 LTFP02788 710 aa17.96■□□□□ 0.46
CHUK-201ENST00000370397 PGAM1P18669 254 aa17.96■□□□□ 0.46
CHUK-201ENST00000370397 UBA1P22314 1058 aaKnown RBP17.96■□□□□ 0.46
CHUK-201ENST00000370397 MSX2P35548 267 aaPredicted RBP17.96■□□□□ 0.46
CHUK-201ENST00000370397 KLC3Q6P597 504 aa17.96■□□□□ 0.46
CHUK-201ENST00000370397 PPP4R1Q8TF05 950 aa17.96■□□□□ 0.46
CHUK-201ENST00000370397 PRPF18Q99633 342 aaKnown RBP17.96■□□□□ 0.46
CHUK-201ENST00000370397 AMHP03971 560 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 F7P08709 466 aaPredicted RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 PTPN1P18031 435 aaKnown RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 MGAT1P26572 445 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 EPHA3P29320 983 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 IRF9Q00978 393 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 CCDC153Q494R4 210 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 ACVR1CQ8NER5 493 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 ANKRD36BP1Q96IX9 119 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 ZNF512Q96ME7 567 aaPredicted RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 MINDY3Q9H8M7 445 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 COPS7BQ9H9Q2 264 aaPredicted RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 SYBUQ9NX95 663 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TSPAN16Q9UKR8 245 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 RALGAPA2Q2PPJ7 1873 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 RNASEH2AO75792 299 aaKnown RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 JUNP05412 331 aaKnown RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 ZFP1Q6P2D0 407 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TTC30AQ86WT1 665 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 CDR2LQ86X02 465 aaPredicted RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 SLC4A5Q9BY07 1137 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 CDT1Q9H211 546 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 IFT122Q9HBG6 1241 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 RGSL1A5PLK6 1076 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TMEM114B3SHH9 223 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TOMM70O94826 608 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TNNC2P02585 160 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 CHRNGP07510 517 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 ATP6V1B1P15313 513 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 NUDT2P50583 147 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 TXNL4AP83876 142 aaKnown RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 CARM1Q86X55 608 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 C12orf29Q8N999 325 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 GRIN3AQ8TCU5 1115 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 PGBD4Q96DM1 585 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 WDR55Q9H6Y2 383 aaPredicted RBP17.95■□□□□ 0.46
CHUK-201ENST00000370397 CDY2AQ9Y6F7 541 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 CDY1Q9Y6F8 540 aa17.95■□□□□ 0.46
CHUK-201ENST00000370397 SERPINB5P36952 375 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 PSMD8P48556 350 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 NR2C2P49116 596 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 OSTNP61366 133 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 LSM12Q3MHD2 195 aaKnown RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 FSCBQ5H9T9 825 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 AMIGO2Q86SJ2 522 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 TMEM110Q86TL2 294 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 SNX32Q86XE0 403 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 DCLK2Q8N568 766 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 LZICQ8WZA0 190 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 ZNF597Q96LX8 424 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 CSPG4P5Q96PW8 444 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 RANBP9Q96S59 729 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 KCTD15Q96SI1 283 aaPredicted RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 CDRT15Q96T59 188 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 RBBP8Q99708 897 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 FERMT1Q9BQL6 677 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 HEMK1Q9Y5R4 338 aaPredicted RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 A0A0A0MRY4 1105 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 PAPSS1O43252 624 aaPredicted RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 ITGB3P05106 788 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 ERVK-10P10266 1014 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 RARS2Q5T160 578 aaKnown RBP17.94■□□□□ 0.46
CHUK-201ENST00000370397 MAMDC4Q6UXC1 1216 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 UPF1Q92900 1129 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHUK-201ENST00000370397 SPATA13Q96N96 652 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 TCHPQ9BT92 498 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 TCF7L2Q9NQB0 619 aa17.94■□□□□ 0.46
CHUK-201ENST00000370397 E2F8A0AVK6 867 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 STX16-NPEPL1H3BU86 382 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 TRMUO75648 421 aaKnown RBP17.93■□□□□ 0.46
CHUK-201ENST00000370397 CCR10P46092 362 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 NR1H2P55055 460 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 CTBSQ01459 385 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 JADE1Q6IE81 842 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 KYQ8NBH2 561 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 TMIGD2Q96BF3 282 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 C1QTNF1Q9BXJ1 281 aa17.93■□□□□ 0.46
CHUK-201ENST00000370397 CYP3A43Q9HB55 503 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms