RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 IRAK1P51617 712 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 COPAP53621 1224 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 RPL6Q02878 288 aaKnown RBP24.66■■□□□ 1.54
PFDN2-201ENST00000368010 C5orf22Q49AR2 442 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 SPDYCQ5MJ68 293 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 PLA2G2CQ5R387 149 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 ACAD10Q6JQN1 1059 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 PPP1R2P3Q6NXS1 205 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 CYP2U1Q7Z449 544 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 FAM131BQ86XD5 332 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 TMEFF1Q8IYR6 380 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 ZNF366Q8N895 744 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 C12orf50Q8NA57 414 aaPredicted RBP24.66■■□□□ 1.54
PFDN2-201ENST00000368010 SIPA1Q96FS4 1042 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 SYT11Q9BT88 431 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 NUP58Q9BVL2 599 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 FBRSQ9HAH7 460 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 AIPL1Q9NZN9 384 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 SUN2Q9UH99 717 aa24.66■■□□□ 1.54
PFDN2-201ENST00000368010 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.66■■□□□ 1.54
PFDN2-201ENST00000368010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.65■■□□□ 1.54
PFDN2-201ENST00000368010 AP5Z1O43299 807 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 CLDN11O75508 207 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 GJB6O95452 261 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 ZNF806P0C7X5 589 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 PTPN9P43378 593 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 ID4P47928 161 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 ZNF177Q13360 481 aaPredicted RBP24.65■■□□□ 1.54
PFDN2-201ENST00000368010 CDO1Q16878 200 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 CCDC14Q49A88 953 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 RNF219Q5W0B1 726 aaPredicted RBP24.65■■□□□ 1.54
PFDN2-201ENST00000368010 CXorf57Q6NSI4 855 aaKnown RBP24.65■■□□□ 1.54
PFDN2-201ENST00000368010 DNAJC24Q6P3W2 148 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 LRRC31Q6UY01 552 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 APCDD1Q8J025 514 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 KDM1BQ8NB78 822 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 C1orf74Q96LT6 269 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 HAPLN3Q96S86 360 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 PPP1R9BQ96SB3 815 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 SNX10Q9Y5X0 201 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 CFAP54Q96N23 3096 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 PLXND1Q9Y4D7 1925 aa24.65■■□□□ 1.54
PFDN2-201ENST00000368010 SDK1Q7Z5N4 2213 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 SRPRAP08240 638 aaKnown RBP24.64■■□□□ 1.54
PFDN2-201ENST00000368010 ACADMP11310 421 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 GPD1P21695 349 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 RFC1P35251 1148 aaPredicted RBP24.64■■□□□ 1.54
PFDN2-201ENST00000368010 PRKCIP41743 596 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 CDH4P55283 916 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 ECT2LQ008S8 904 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 C15orf59Q2T9L4 293 aaPredicted RBP24.64■■□□□ 1.54
PFDN2-201ENST00000368010 ARMCX6Q7L4S7 300 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 STRADAQ7RTN6 431 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 CACUL1Q86Y37 369 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 MYO19Q96H55 970 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 MRGPRX3Q96LB0 322 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 HAUS4Q9H6D7 363 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 CD93Q9NPY3 652 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 TMPRSS4Q9NRS4 437 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 USP36Q9P275 1121 aaKnown RBP24.64■■□□□ 1.54
PFDN2-201ENST00000368010 ERVW-1Q9UQF0 538 aa24.64■■□□□ 1.54
PFDN2-201ENST00000368010 CKAP5Q14008 2032 aa24.64■■□□□ 1.53
PFDN2-201ENST00000368010 ANKRD62A6NC57 917 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 SIGLEC16A6NMB1 481 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 MZF1P28698 734 aaPredicted RBP24.63■■□□□ 1.53
PFDN2-201ENST00000368010 PBX1P40424 430 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 PTGER3P43115 390 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 CTSOP43234 321 aaPredicted RBP24.63■■□□□ 1.53
PFDN2-201ENST00000368010 PLK1P53350 603 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 SULT2A1Q06520 285 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 SF3A2Q15428 464 aaKnown RBP24.63■■□□□ 1.53
PFDN2-201ENST00000368010 ARL13BQ3SXY8 428 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 LYSMD4Q5XG99 296 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 E4F1Q66K89 784 aaPredicted RBP24.63■■□□□ 1.53
PFDN2-201ENST00000368010 ZNF683Q8IZ20 524 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 MCOLN2Q8IZK6 566 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 RMDN1Q96DB5 314 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 PRSS16Q9NQE7 514 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 ITM2CQ9NQX7 267 aa24.63■■□□□ 1.53
PFDN2-201ENST00000368010 DRGXA6NNA5 263 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 E9PAM4 449 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 NDUFS2O75306 463 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 SDHBP21912 280 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 CD6P30203 668 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 KLHL30Q0D2K2 578 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 RSPO4Q2I0M5 234 aaPredicted RBP24.62■■□□□ 1.53
PFDN2-201ENST00000368010 HNRNPA1L2Q32P51 320 aaKnown RBP24.62■■□□□ 1.53
PFDN2-201ENST00000368010 AASDHQ4L235 1098 aaPredicted RBP24.62■■□□□ 1.53
PFDN2-201ENST00000368010 SH3PXD2AQ5TCZ1 1133 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 WDR59Q6PJI9 974 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 PIGKQ92643 395 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 SMOC1Q9H4F8 434 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 TAS2R14Q9NYV8 317 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 IFNKQ9P0W0 207 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 CDV3Q9UKY7 258 aaKnown RBP24.62■■□□□ 1.53
PFDN2-201ENST00000368010 TBC1D30Q9Y2I9 924 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 ABCA7Q8IZY2 2146 aa24.62■■□□□ 1.53
PFDN2-201ENST00000368010 FRYLO94915 3013 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 A0A1W2PQJ5 194 aa24.61■■□□□ 1.53
PFDN2-201ENST00000368010 TCRBV5S1A1TA0A578 114 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms