RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 CYP4V2Q6ZWL3 525 aaPredicted RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 VPS52Q8N1B4 723 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ARMC2Q8NEN0 867 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 FAF2Q96CS3 445 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 KCNK16Q96T55 309 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 RAB6CQ9H0N0 254 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 USP29Q9HBJ7 922 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ALG13Q9NP73 1137 aaKnown RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ADAM28Q9UKQ2 775 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ARHGEF37A1IGU5 675 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 FCHO1O14526 889 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 TADA2AO75478 443 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 SKAP2O75563 359 aaPredicted RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 RFC2P35250 354 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 RAP1GDS1P52306 607 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 SNX16P57768 344 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 YWHAZP63104 245 aaKnown RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 CCDC6Q16204 474 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 C15orf59Q2T9L4 293 aaPredicted RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ATG16L1Q676U5 607 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 IRGCQ6NXR0 463 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 C4orf22Q6V702 233 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 ZDHHC17Q8IUH5 632 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 TAB3Q8N5C8 712 aaPredicted RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 NDRG1Q92597 394 aaKnown RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 FAM136AQ96C01 138 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 PEBP4Q96S96 227 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 TMEM106CQ9BVX2 250 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 NMRK1Q9NWW6 199 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 STX18Q9P2W9 335 aaKnown RBP20.87■□□□□ 0.93
CBWD3-201ENST00000360171 LRCH1Q9Y2L9 728 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 PLLPQ9Y342 182 aa20.87■□□□□ 0.93
CBWD3-201ENST00000360171 MAGEC1O60732 1142 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 TIMP1P01033 207 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 LINGO3P0C6S8 592 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 CSF2RAP15509 400 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 PDGFRAP16234 1089 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 CDH6P55285 790 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 SLC34A1Q06495 639 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 PDK2Q15119 407 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 RCN1Q15293 331 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 ZRSR2Q15696 482 aaKnown RBP20.86■□□□□ 0.93
CBWD3-201ENST00000360171 RINLQ6ZS11 566 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 THEM5Q8N1Q8 247 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 KCTD13Q8WZ19 329 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 MTBPQ96DY7 904 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 RNF157Q96PX1 679 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 MRPL9Q9BYD2 267 aaKnown RBP20.86■□□□□ 0.93
CBWD3-201ENST00000360171 TRIM49D1C9J1S8 452 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 NT5C1B-RDH14C9J2C7 533 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 PSMG1O95456 288 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 TGM2P21980 687 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 CCDC14Q49A88 953 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 SNX30Q5VWJ9 437 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 SLC26A9Q7LBE3 791 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 GPRIN1Q7Z2K8 1008 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 TMEM173Q86WV6 379 aaPredicted RBP20.86■□□□□ 0.93
CBWD3-201ENST00000360171 MAP7D3Q8IWC1 876 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 SMARCD1Q96GM5 515 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 GPR62Q9BZJ7 368 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 POPDC2Q9HBU9 364 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 SIRPGQ9P1W8 387 aa20.86■□□□□ 0.93
CBWD3-201ENST00000360171 F8W8V4 182 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 KIAA0355O15063 1070 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 GALTP07902 379 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 OR4Q2P0C623 313 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 CHRM1P11229 460 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 NDUFV1P49821 464 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 KPNB1Q14974 876 aaKnown RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 NPNTQ6UXI9 565 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 LRRC43Q8N309 656 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 MCUQ8NE86 351 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 BCL7CQ8WUZ0 217 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 B3GALT6Q96L58 329 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 ZNF212Q9UDV6 495 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 BCLAF3A2AJT9 711 aaKnown RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 CAPN14A8MX76 684 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 HHLA1C9JL84 531 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 H7C0C1 242 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 DPYSL4O14531 572 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 CAPN15O75808 1086 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 OAZ2O95190 189 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 ALDH2P05091 517 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 BDNFP23560 247 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 SCNN1AP37088 669 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 ATP5OP48047 213 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 MMRN1Q13201 1228 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 MTM1Q13496 603 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 TBCCQ15814 346 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 DBN1Q16643 649 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 TMCO2Q7Z6W1 182 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 PRPF39Q86UA1 669 aaKnown RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 ZC3H18Q86VM9 953 aaKnown RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 TMPRSS6Q8IU80 811 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 PRR11Q96HE9 360 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-201ENST00000360171 KLC2Q9H0B6 622 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 ARHGEF4Q9NR80 690 aa20.85■□□□□ 0.93
CBWD3-201ENST00000360171 RAB6BQ9NRW1 208 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms