RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLCO1B3Q9NPD5 702 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DNPEPQ9ULA0 475 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SLC30A1Q9Y6M5 507 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 PREX1Q8TCU6 1659 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 A0A0U1RQJ8 604 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 CCDC162PA2VCL2 907 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ASMTLO95671 621 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ITGAVP06756 1048 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FAAP100Q0VG06 881 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 TTLL4Q14679 1199 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DCAF4L1Q3SXM0 396 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DUPD1Q68J44 220 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ADCY4Q8NFM4 1077 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 BPIFB6Q8NFQ5 453 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 AGAP1Q9UPQ3 857 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FAM237AA0A1B0GTK4 181 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 WDR27A2RRH5 827 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 CHRM3P20309 590 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ALYREFQ86V81 257 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 C11orf74Q86VG3 221 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ACMSDQ8TDX5 336 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DSEQ9UL01 958 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ASTN2O75129 1339 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 A0A096LPK6 155 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 NCF1BA6NI72 391 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 NCF1CA8MVU1 366 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 NCF1P14598 390 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FEN1P39748 380 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 GIT2Q14161 759 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF268Q14587 947 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 MOXD1Q6UVY6 613 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FAM43BQ6ZT52 329 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 EPHX4Q8IUS5 362 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ACTRT2Q8TDY3 377 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FRMD6Q96NE9 622 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ISCA1Q9BUE6 129 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 LRRC19Q9H756 370 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 REEP1Q9H902 201 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF304Q9HCX3 659 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF222Q9UK12 451 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 OLR1P78380 273 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 NTRK3Q16288 839 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 EGFLAMQ63HQ2 1017 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 MICALL2Q8IY33 904 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FITM2Q8N6M3 262 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SPATA33Q96N06 139 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SNX9Q9Y5X1 595 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SNX8Q9Y5X2 465 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 SHROOM3Q8TF72 1996 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FDX1P10109 184 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ARL4DP49703 201 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 RPS7P62081 194 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 PYDC2Q56P42 97 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 RASSF6Q6ZTQ3 369 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 RIT2Q99578 217 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 HAT1O14929 419 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 NRG3P56975 720 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 STX4Q12846 297 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
COL6A6-201ENST00000358511 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 MYLPFQ96A32 169 aa8.93□□□□□ -0.98
COL6A6-201ENST00000358511 COL15A1P39059 1388 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 NDUFB5O43674 189 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 VAPBO95292 243 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 NCAM1P13591 858 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ATF4P18848 351 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZRANB3Q5FWF4 1079 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SLFN11Q7Z7L1 901 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CCDC36Q8IYA8 594 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 GSTCDQ8NEC7 633 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 MCFD2Q8NI22 146 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SEMA4DQ92854 862 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TMEM143Q96AN5 459 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TPD52L3Q96J77 140 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ANKEF1Q9NU02 776 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SRP68Q9UHB9 627 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 A0A087X1B8 175 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 EDF1O60869 148 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TMCC2O75069 709 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 NNMTP40261 264 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 RFX4Q33E94 735 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TIGD7Q6NT04 549 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 EIF3MQ7L2H7 374 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 AMIGO2Q86SJ2 522 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 DQX1Q8TE96 717 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZFAND2BQ8WV99 257 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 RNF146Q9NTX7 359 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ITGA11Q9UKX5 1188 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 NPHP4O75161 1426 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF37AP17032 561 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 GLRA2P23416 452 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SCNN1BP51168 640 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms