RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GEMP55040 296 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RHBDF2Q6PJF5 856 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MIER2Q8N344 545 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C15orf40Q8WUR7 153 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 OTUB1Q96FW1 271 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 PLEKHA8Q96JA3 519 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CDH9Q9ULB4 789 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SESN1Q9Y6P5 492 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GRXCR2A6NFK2 248 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ARHGEF15O94989 841 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ENO3P13929 434 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GLRA2P23416 452 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 KLF10Q13118 480 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DPYSL3Q14195 570 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MRPL46Q9H2W6 279 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ING3Q9NXR8 418 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CDH7Q9ULB5 785 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZBTB11O95625 1053 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CLCN5P51795 746 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 PRKD1Q15139 912 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 QRICH1Q2TAL8 776 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SDE2Q6IQ49 451 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MZT2BQ6NZ67 158 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ACTR3BQ9P1U1 418 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NUP214P35658 2090 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C19orf81C9J6K1 198 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 KLRC2P26717 231 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 AKT1P31749 480 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 LIPMQ5VYY2 423 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC35B2Q8TB61 432 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GCNAQ96QF7 691 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAM92AA1XBS5 289 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NPHS1O60500 1241 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 IFNGR2P38484 337 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CRY1Q16526 586 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZACNQ401N2 412 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 AARS2Q5JTZ9 985 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C10orf62Q5T681 223 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MFSD2AQ8NA29 543 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SNX19Q92543 992 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CADM1Q9BY67 442 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GPN2Q9H9Y4 310 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ARMC1Q9NVT9 282 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 IFT80Q9P2H3 777 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DNPEPQ9ULA0 475 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT2A1Q9Y4X1 527 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CNTNAP4Q9C0A0 1308 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 B4GALT4O60513 344 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MAPK9P45984 424 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 WDR4P57081 412 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GTF2IP78347 998 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 THAP5Q7Z6K1 395 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C4orf33Q8N1A6 199 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 OTULINQ96BN8 352 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CFL2Q9Y281 166 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GSAPA4D1B5 854 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ITM2AO43736 263 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UNGP13051 313 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 GSSP48637 474 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 AQP5P55064 265 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 COG2Q14746 738 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DCAF4L1Q3SXM0 396 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C5orf22Q49AR2 442 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ASB9Q96DX5 294 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MCRS1Q96EZ8 462 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RNF145Q96MT1 663 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CYP2S1Q96SQ9 504 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NUDT12Q9BQG2 462 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 OR2B2Q9GZK3 357 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 AGAP1Q9UPQ3 857 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CDH6P55285 790 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NOMO1Q15155 1222 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MDH1BQ5I0G3 518 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 HPS1Q92902 700 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NARFQ9UHQ1 456 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TLL1O43897 1013 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM32Q13049 653 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SNRNP48Q6IEG0 339 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ANKRD23Q86SG2 305 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 AKT1S1Q96B36 256 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DERAQ9Y315 318 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RP1P56715 2156 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UBXN8O00124 270 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NRP2O60462 931 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ATP6V1B1P15313 513 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MSH3P20585 1137 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 M6PRP20645 277 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DYNLL1P63167 89 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TFAMQ00059 246 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SELPLGQ14242 412 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 METTL2BQ6P1Q9 378 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ARMC8Q8IUR7 673 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SH3RF3Q8TEJ3 882 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 HAS1Q92839 578 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CREB3L1Q96BA8 519 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FOXO6A8MYZ6 492 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A9O60656 530 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A6P19224 532 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A1P22309 533 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms