RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PPP1R11O60927 126 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ITGAVP06756 1048 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 C4BPBP20851 252 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 MGAT1P26572 445 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 MIIPQ5JXC2 388 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 SNX30Q5VWJ9 437 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 HDAC7Q8WUI4 952 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ABCC13Q9NSE7 274 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 KLHL28Q9NXS3 571 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 CNTNAP2Q9UHC6 1331 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 LDLRP01130 860 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 EIF2S1P05198 315 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 YWHAQP27348 245 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TUBP50607 506 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 PRKCQQ04759 706 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 CCDC81Q6ZN84 652 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 LUZP2Q86TE4 346 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 STK32AQ8WU08 396 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 C9orf16Q9BUW7 83 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 STMN3Q9NZ72 180 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ADAM30Q9UKF2 790 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 WDR27A2RRH5 827 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 DYRK3O43781 588 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 BMP10O95393 424 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 AMPD1P23109 780 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TTKP33981 857 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 FASTKQ14296 549 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 POU6F1Q14863 301 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 OASLQ15646 514 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 RNF43Q68DV7 783 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF544Q6NX49 715 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ERAP2Q6P179 960 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 MIER2Q8N344 545 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 UROC1Q96N76 676 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TRAPPC9Q96Q05 1148 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 FAM192AQ9GZU8 254 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ARMC7Q9H6L4 198 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 SFMBT1Q9UHJ3 866 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 LZTS1Q9Y250 596 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TRPV2Q9Y5S1 764 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 MRASO14807 208 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 FGRP09769 529 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 SCNN1BP51168 640 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 IFI35P80217 286 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PPP3CAQ08209 521 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 MFSD10Q14728 455 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PCID2Q5JVF3 399 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CRELD2Q6UXH1 353 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 BBS12Q6ZW61 710 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PTAR1Q7Z6K3 402 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PSTKQ8IV42 348 aaKnown RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 SPATA20Q8TB22 786 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 BAP1Q92560 729 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 C18orf25Q96B23 403 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 RAD18Q9NS91 495 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CYP39A1Q9NYL5 469 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CPA4Q9UI42 421 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 V9GYQ6 96 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CLUHO75153 1309 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CBX4O00257 560 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CD3EAPO15446 510 aaKnown RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 MAPK8P45983 427 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CSE1LP55060 971 aaKnown RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 FAAP100Q0VG06 881 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PPIL2Q13356 520 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 MAMLD1Q13495 774 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 SLC44A4Q53GD3 710 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 KHDRBS2Q5VWX1 349 aaKnown RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF470Q6ECI4 717 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 EID3Q8N140 333 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 MCOLN3Q8TDD5 553 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 BBS2Q9BXC9 721 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ETNK2Q9NVF9 386 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ATP6V1B2P21281 511 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PTPN3P26045 913 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 HALP42357 657 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ECM1Q16610 540 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 PREPLQ4J6C6 727 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CYP4Z2PQ8N1L4 340 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 AADATQ8N5Z0 425 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 TRPM4Q8TD43 1214 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 SLC2A14Q8TDB8 520 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 POLR1EQ9GZS1 481 aaKnown RBP11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ACP6Q9NPH0 428 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 ASTN1O14525 1302 aa11.97□□□□□ -0.49
COL9A1-202ENST00000357250 GNG14A0A1W2PPG7 69 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms