RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HS3ST4Q9Y661 456 aa18.08■□□□□ 0.48
NPAS3-202ENST00000356141 CCDC195A0A1B0GUA6 201 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 FAM47DPA6NHR8 397 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 VNN2O95498 520 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ABHD2P08910 425 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 IRF1P10914 325 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ATP2A2P16615 1042 aaKnown RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SAT1P21673 171 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ATP5DP30049 168 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 CD68P34810 354 aaPredicted RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 OVGP1Q12889 678 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 MAPRE1Q15691 268 aaKnown RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 EMC10Q5UCC4 262 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 KIAA1841Q6NSI8 718 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 DCP1BQ8IZD4 617 aaKnown RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 TCP10LQ8TDR4 215 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 TTC17Q96AE7 1141 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SIGLEC10Q96LC7 697 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 CYTH2Q99418 400 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ABCC13Q9NSE7 274 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 PSAT1Q9Y617 370 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 MTMR11A4FU01 709 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 C5orf60A6NFR6 353 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 RPLP2P05387 115 aaKnown RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 NEFHP12036 1026 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 TYMPP19971 482 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 CCR1P32246 355 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 C1QTNF8P60827 252 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SEMA3BQ13214 749 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 PRKD1Q15139 912 aaPredicted RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SEPT7Q16181 437 aaKnown RBP18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ZNF280DQ6N043 979 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 RTP4Q96DX8 246 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 ZNF778Q96MU6 729 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 GORASP1Q9BQQ3 440 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SLC39A8Q9C0K1 460 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 LGALS13Q9UHV8 139 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 PRUNE2Q8WUY3 3088 aa18.07■□□□□ 0.48
NPAS3-202ENST00000356141 SLC12A8A0AV02 714 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 STK10O94804 968 aaKnown RBP18.06■□□□□ 0.48
NPAS3-202ENST00000356141 OAZ2O95190 189 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 MT-ND3P03897 115 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 ALDH7A1P49419 539 aaKnown RBP18.06■□□□□ 0.48
NPAS3-202ENST00000356141 KCNQ1P51787 676 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 DEFB103AP81534 67 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 ITKQ08881 620 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 ALFQ53S48 1182 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 PIK3R6Q5UE93 754 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 MECRQ9BV79 373 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 FTHL17Q9BXU8 183 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 FOXP3Q9BZS1 431 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 KANSL3Q9P2N6 904 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 CCDC189A1A4V9 331 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 ARHGAP42A6NI28 874 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 PMPCBO75439 489 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 NPAS4Q8IUM7 802 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 IPMKQ8NFU5 416 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 FAM111AQ96PZ2 611 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 NACA2Q9H009 215 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 PCMTD2Q9NV79 361 aa18.06■□□□□ 0.48
NPAS3-202ENST00000356141 GARSP41250 739 aaKnown RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 BIRC2Q13490 618 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 GKAP1Q5VSY0 366 aaPredicted RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 HHATQ5VTY9 493 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 CDHR3Q6ZTQ4 885 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 OTOP2Q7RTS6 562 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 CACNA2D3Q8IZS8 1091 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 PABPC5Q96DU9 382 aaKnown RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 TMEM39AQ9NV64 488 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 F9P00740 461 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 GBP2P32456 591 aaPredicted RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 XRCC4Q13426 336 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 FAM133BQ5BKY9 247 aaKnown RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 SLC39A5Q6ZMH5 540 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 UNKQ9C0B0 810 aaKnown RBP18.05■□□□□ 0.48
NPAS3-202ENST00000356141 ACSS2Q9NR19 701 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
NPAS3-202ENST00000356141 CEP290O15078 2479 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 E9PAM4 449 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 NEBLO76041 1014 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 YWHAQP27348 245 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 TBX4P57082 545 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 KLHL38Q2WGJ6 581 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 CNTD1Q8N815 330 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 MFSD3Q96ES6 412 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 MLPHQ9BV36 600 aaPredicted RBP18.04■□□□□ 0.48
NPAS3-202ENST00000356141 BRD8Q9H0E9 1235 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 RPS6KL1Q9Y6S9 549 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 MYO16Q9Y6X6 1858 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 ATF6P18850 670 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 MAGEA9P43362 315 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 CHRNA4P43681 627 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 SEMA5AQ13591 1074 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 CROCCP2Q86T23 111 aa18.04■□□□□ 0.48
NPAS3-202ENST00000356141 ATPAF2Q8N5M1 289 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms