RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SH3GL2Q99962 352 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SPG21Q9NZD8 308 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 ADAM28Q9UKQ2 775 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 CALCAP01258 141 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 RHOAP61586 193 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 OCRLQ01968 901 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 MPP3Q13368 585 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 CARNMT1Q8N4J0 409 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 EXT2Q93063 718 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SIKE1Q9BRV8 207 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 NT5MQ9NPB1 228 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 RHBDL2Q9NX52 303 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 A0A0U1RQF3 1178 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SLCO1B7G3V0H7 640 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TMCC1O94876 653 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 MLNP12872 115 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 CLDN10P78369 228 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 ATXN2LQ8WWM7 1075 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 HIST1H2AHQ96KK5 128 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 FOPNLQ96NB1 174 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 HIST1H2AJQ99878 128 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 LRCH4O75427 683 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 ADRA1BP35368 520 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 EGFL8Q99944 293 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 HTATIP2Q9BUP3 242 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
SMAD9-201ENST00000350148 POLR1EQ9GZS1 481 aaKnown RBP12.44□□□□□ -0.42
SMAD9-201ENST00000350148 GOLGA8RI6L899 631 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 FAM153BP0C7A2 387 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 GLUD2P49448 558 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 APLP1P51693 650 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CCDC153Q494R4 210 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 FAM153CQ494X1 144 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 LGI2Q8N0V4 545 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.423e-6■■□□□ 11.9
SMAD9-201ENST00000350148 TFAP2BQ92481 460 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 HHIPL1Q96JK4 782 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 UBA2Q9UBT2 640 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 BAG5Q9UL15 447 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ZNF197O14709 1029 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 PDHA1P08559 390 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 TPSB2P20231 275 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CRABP2P29373 138 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CDKN2BP42772 138 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 BRCC3P46736 316 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 TPSAB1Q15661 275 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 SYCP2LQ5T4T6 812 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 PTRHD1Q6GMV3 140 aaKnown RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CRELD2Q6UXH1 353 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 LMO3Q8TAP4 145 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 PGLYRP2Q96PD5 576 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 FAM53CQ9NYF3 392 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 SLC4A7Q9Y6M7 1214 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CCDC195A0A1B0GUA6 201 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 DIAPH2O60879 1101 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 VPS26AO75436 327 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 SOAT2O75908 522 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 EEF1DP29692 281 aaKnown RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 LRPAP1P30533 357 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ITGA9Q13797 1035 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 DNAL1Q4LDG9 190 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ANKRD20A4Q4UJ75 823 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 MROH9Q5TGP6 573 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 SDE2Q6IQ49 451 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 TMCO5AQ8N6Q1 288 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 MINDY3Q9H8M7 445 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ATP13A1Q9HD20 1204 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 THG1LQ9NWX6 298 aaKnown RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 SLC39A10Q9ULF5 831 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ALOX15BO15296 676 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ITGALP20701 1170 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 GPD2P43304 727 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 MMP13P45452 471 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CDK7P50613 346 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 ABCE1P61221 599 aaKnown RBP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD9-201ENST00000350148 CRYMQ14894 314 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 OLFML1Q6UWY5 402 aa12.43□□□□□ -0.42
SMAD9-201ENST00000350148 C15orf39Q6ZRI6 1047 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms