RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 ULK4Q96C45 1275 aa13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 CPNE1Q99829 537 aa13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 DENND2DQ9H6A0 471 aaPredicted RBP13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 EFCAB1Q9HAE3 211 aa13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 PTPRHQ9HD43 1115 aa13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.26
DNMT3B-203ENST00000348286 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 DDHD2O94830 711 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 CTBP1Q13363 440 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 CYLC2Q14093 348 aaPredicted RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 RBBP7Q16576 425 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 AGAP9Q5VTM2 703 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 PPTC7Q8NI37 304 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SMARCD1Q96GM5 515 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SLC12A8A0AV02 714 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 APOA4P06727 396 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 XPAP23025 273 aaPredicted RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 MSX2P35548 267 aaPredicted RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 AGKQ53H12 422 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 IYDQ6PHW0 289 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 TMC7Q7Z402 723 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 FBXO32Q969P5 355 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 CCDC138Q96M89 665 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 NCKIPSDQ9NZQ3 722 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 GSC2O15499 205 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 RHOBTB1O94844 696 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 CHRM3P20309 590 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 IVDP26440 423 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SPDYAQ5MJ70 313 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 CDRT15Q96T59 188 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 UTP6Q9NYH9 597 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 SNX10Q9Y5X0 201 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-203ENST00000348286 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CXorf49A8MYA2 514 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 BPGMP07738 259 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ADRA1BP35368 520 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 HADHAP40939 763 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 BRCC3P46736 316 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 RHBDF2Q6PJF5 856 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 BNC2Q6ZN30 1099 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ZNF398Q8TD17 642 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 NCLNQ969V3 563 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 TUBGCP3Q96CW5 907 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CNBD2Q96M20 576 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 LRP5O75197 1615 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 AHDC1Q5TGY3 1603 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 hCG_2014768A0A024R1R8 64 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CSH1P0DML2 217 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CSH2P0DML3 217 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CD151P48509 253 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CACNA2D1P54289 1103 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ABCE1P61221 599 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 VWA5B1Q5TIE3 1220 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 MARC1Q5VT66 337 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 MPP5Q8N3R9 675 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 BANPQ8N9N5 519 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 AZIN2Q96A70 460 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ADAM2Q99965 735 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 DMAP1Q9NPF5 467 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 CLUHO75153 1309 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 FZD9O00144 591 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 KIF1CO43896 1103 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 PFDN1O60925 122 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 TSHRP16473 764 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 TSPAN8P19075 237 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 SLC25A11Q02978 314 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 SNX17Q15036 470 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 APBB2Q92870 758 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 MFSD3Q96ES6 412 aa13.38□□□□□ -0.27
DNMT3B-203ENST00000348286 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms