RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 C1orf232A0A0U1RR37 186 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 SAC3D1A6NKF1 404 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 TAS1R3Q7RTX0 852 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 PGAM4Q8N0Y7 254 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 SDCBP2Q9H190 292 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 PCDHA11Q9Y5I1 949 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 H3BMQ9 156 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 RPS6KA4O75676 772 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 LSM8O95777 96 aaKnown RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 HMGCRP04035 888 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 POLR2BP30876 1174 aaKnown RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 CRKP46108 304 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 BCAR1P56945 870 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 TUBA4AP68366 448 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 RALGDSQ12967 914 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 TRPC3Q13507 836 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 KCNT2Q6UVM3 1135 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 C4orf19Q8IY42 314 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 COG8Q96MW5 612 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 RPF2Q9H7B2 306 aaKnown RBP15.69■□□□□ 0.1
LMNA-201ENST00000347559 PCDHB12Q9Y5F1 795 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 GRAP2O75791 330 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 CLIC3O95833 236 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TRUB2O95900 331 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 PRKCGP05129 697 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 RWDD4Q6NW29 188 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 LYSMD3Q7Z3D4 306 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 CMASQ8NFW8 434 aaPredicted RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 RP9Q8TA86 221 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 DHX35Q9H5Z1 703 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 GID8Q9NWU2 228 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 CYTH4Q9UIA0 394 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 ITGB1BP2Q9UKP3 347 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TMEM98Q9Y2Y6 226 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 CORINQ9Y5Q5 1042 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 ACOT8O14734 319 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TIPRLO75663 272 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 BMP10O95393 424 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 ZNF182P17025 639 aaPredicted RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 GLDCP23378 1020 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 RGS21Q2M5E4 152 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TIFABQ6ZNK6 161 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 PLD6Q8N2A8 252 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 CDKL2Q92772 493 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 PGLYRP2Q96PD5 576 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 ZC3H12CQ9C0D7 883 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 EFCAB1Q9HAE3 211 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 MYL6P60660 151 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 PMS2P3Q13401 168 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TFDP2Q14188 446 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 NEDD8Q15843 81 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TRIM16LQ309B1 348 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 SLC15A4Q8N697 577 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 HM13Q8TCT9 377 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 TRPC4APQ8TEL6 797 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 CPXM1Q96SM3 734 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 FRMD8Q9BZ67 464 aaPredicted RBP15.68■□□□□ 0.1
LMNA-201ENST00000347559 POLR1BQ9H9Y6 1135 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 FAM198AQ9UFP1 575 aa15.68■□□□□ 0.1
LMNA-201ENST00000347559 NDUFB5O43674 189 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 KDM1AO60341 852 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 CCNE2O96020 404 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 DPYSQ14117 519 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 TAZQ16635 292 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 C15orf59Q2T9L4 293 aaPredicted RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 LDLRAP1Q5SW96 308 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 NIPAL1Q6NVV3 410 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 CHST15Q7LFX5 561 aaPredicted RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 PLD5Q8N7P1 536 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 SCAIQ8N9R8 606 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 AGAP3Q96P47 875 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 CFAP99D6REC4 459 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 NFIBO00712 420 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 AKAP10O43572 662 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 MCCD1P59942 119 aaPredicted RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 ZNF534Q76KX8 674 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 SAMD3Q8N6K7 520 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 HAPLN2Q9GZV7 340 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 SACM1LQ9NTJ5 587 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 NXF1Q9UBU9 619 aaKnown RBP15.67■□□□□ 0.1
LMNA-201ENST00000347559 CNTN6Q9UQ52 1028 aa15.67■□□□□ 0.1
LMNA-201ENST00000347559 LTFP02788 710 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ERVK-10P10266 1014 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 TFE3P19532 575 aaPredicted RBP15.66■□□□□ 0.1
LMNA-201ENST00000347559 CNTFP26441 200 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ZNF132P52740 706 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 METTL21CQ5VZV1 264 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 LAYNQ6UX15 382 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 PQLC3Q8N755 202 aa15.66■□□□□ 0.1
LMNA-201ENST00000347559 ACMSDQ8TDX5 336 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms