RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 GFRA2O00451 464 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 PENKP01210 267 aaPredicted RBP19.3■□□□□ 0.68
CDHR4-201ENST00000343366 ARSAP15289 507 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 L1CAMP32004 1257 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 AUHQ13825 339 aaKnown RBP19.3■□□□□ 0.68
CDHR4-201ENST00000343366 E2F5Q15329 346 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 CSRP2Q16527 193 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 LPAL2Q16609 132 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 ANO4Q32M45 955 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 NADSYN1Q6IA69 706 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 PRR23CQ6ZRP0 262 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 TPGS1Q6ZTW0 290 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 DAAM2Q86T65 1068 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 TPCN2Q8NHX9 752 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 BTBD6Q96KE9 485 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 EPAS1Q99814 870 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 SIK2Q9H0K1 926 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 GTSE1Q9NYZ3 720 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 AP4E1Q9UPM8 1137 aa19.3■□□□□ 0.68
CDHR4-201ENST00000343366 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
CDHR4-201ENST00000343366 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.29■□□□□ 0.68
CDHR4-201ENST00000343366 HRO43593 1189 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 SPOPO43791 374 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 CACNG3O60359 315 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 PAPSS2O95340 614 aaPredicted RBP19.29■□□□□ 0.68
CDHR4-201ENST00000343366 CHRNB1P11230 501 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 PMLP29590 882 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 SSR1P43307 286 aaKnown RBP19.29■□□□□ 0.68
CDHR4-201ENST00000343366 TNK2Q07912 1038 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 RAP1GAP2Q684P5 730 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 TMEM25Q86YD3 366 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 MAP7D3Q8IWC1 876 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 RHOT1Q8IXI2 618 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 LGI2Q8N0V4 545 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 ARFGAP1Q8N6T3 406 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 CCDC185Q8N715 623 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 CCDC26Q8TAB7 109 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 KIAA1524Q8TCG1 905 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 RPRD1AQ96P16 312 aaPredicted RBP19.29■□□□□ 0.68
CDHR4-201ENST00000343366 ALS2CR12Q96Q35 445 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 DDX56Q9NY93 547 aaKnown RBP19.29■□□□□ 0.68
CDHR4-201ENST00000343366 PCSK1NQ9UHG2 260 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 ALG6Q9Y672 507 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 PIAS3Q9Y6X2 628 aa19.29■□□□□ 0.68
CDHR4-201ENST00000343366 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 IGLV3-10A0A075B6K4 115 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 A0A1B0GVM2 712 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 TCAF2A6NFQ2 919 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 DRGXA6NNA5 263 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 E9PAM4 449 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 NEDD8-MDP1E9PL57 170 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 TM4SF5O14894 197 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 PSTPIP1O43586 416 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 GDF9O60383 454 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 BUB1BO60566 1050 aaPredicted RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 CLDN11O75508 207 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 TYRP14679 529 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 SLC6A4P31645 630 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 GJA4P35212 333 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 HCAR3P49019 387 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 CCR3P51677 355 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 CDH4P55283 916 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 SHC2P98077 582 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 SATB1Q01826 763 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 SLC25A11Q02978 314 aaKnown RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 PDK2Q15119 407 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 FYB2Q5VWT5 728 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 RNF43Q68DV7 783 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 FBXL22Q6P050 247 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 CHST9Q7L1S5 443 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 VSIG1Q86XK7 387 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 SNRNP25Q9BV90 132 aaKnown RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 ZWILCHQ9H900 591 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 STIM2Q9P246 746 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 RCOR3Q9P2K3 495 aaPredicted RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 XPO7Q9UIA9 1087 aaKnown RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
CDHR4-201ENST00000343366 DUSP10Q9Y6W6 482 aa19.28■□□□□ 0.68
CDHR4-201ENST00000343366 MACROD2A1Z1Q3 448 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 SPECC1L-ADORA2AF8WAN1 911 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 K7ESF4 209 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.68
CDHR4-201ENST00000343366 FGF10O15520 208 aaPredicted RBP19.27■□□□□ 0.68
CDHR4-201ENST00000343366 BUB1O43683 1085 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 MSNP26038 577 aaKnown RBP19.27■□□□□ 0.68
CDHR4-201ENST00000343366 CTHP32929 405 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 ARL4AP40617 200 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 DMWDQ09019 674 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 SLC12A1Q13621 1099 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 DPYSL2Q16555 572 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 ODF2Q5BJF6 829 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 RFWD3Q6PCD5 774 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 TBC1D31Q96DN5 1066 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 ZYG11BQ9C0D3 744 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 CATSPERBQ9H7T0 1116 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 PRDM16Q9HAZ2 1276 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 DEC1Q9P2X7 70 aa19.27■□□□□ 0.68
CDHR4-201ENST00000343366 FBXO10Q9UK96 956 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms