RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 C3orf20Q8ND61 904 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 SHKBP1Q8TBC3 707 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 FAM131CQ96AQ9 280 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 C1orf74Q96LT6 269 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 CLUHP3Q96NS8 147 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 PRMT1Q99873 361 aaKnown RBP3.65□□□□□ -1.83
CCDC66-202ENST00000341455 AGPAT1Q99943 283 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 TASP1Q9H6P5 420 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 TLE6Q9H808 572 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 PARD6AQ9NPB6 346 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 UBE2TQ9NPD8 197 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-202ENST00000341455 FAM86C1Q9NVL1 165 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC66-202ENST00000341455 CDH7Q9ULB5 785 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 PRG3Q9Y2Y8 225 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-202ENST00000341455 PCDHGB2Q9Y5G2 931 aa3.65□□□□□ -1.83
CCDC66-202ENST00000341455 A0A1W2PP55 124 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KANSL1LA0AUZ9 987 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 E2F8A0AVK6 867 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SHISA7A6NL88 538 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 A8MXQ7 604 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KCNU1A8MYU2 1149 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LINC01565O15544 149 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 RTN2O75298 545 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ZNF189O75820 626 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KCNK5O95279 499 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CALB1P05937 261 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 FYNP06241 537 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ZNF883P0CG24 379 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 HARSP12081 509 aaKnown RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 OR1D2P34982 312 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CCR10P46092 362 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 NRIP1P48552 1158 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 DGKGP49619 791 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 NEK3P51956 506 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 RELBQ01201 579 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CLCQ05315 142 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SRSF1Q07955 248 aaKnown RBP eCLIP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SEMA3BQ13214 749 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LONRF2Q1L5Z9 754 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 GAB4Q2WGN9 574 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SLC39A12Q504Y0 691 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 HS1BP3Q53T59 392 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 MDH1BQ5I0G3 518 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 DGKKQ5KSL6 1271 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 AFMIDQ63HM1 303 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 E4F1Q66K89 784 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LMBRD2Q68DH5 695 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ZNF783Q6ZMS7 281 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 STRADAQ7RTN6 431 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PDZD3Q86UT5 571 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SPATA2LQ8IUW3 424 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PASD1Q8IV76 773 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KLHDC8BQ8IXV7 354 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CCDC112Q8NEF3 446 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KAT5Q92993 513 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CYFIP2Q96F07 1278 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 NPY6RQ99463 290 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SPATA9Q9BWV2 254 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 TBC1D17Q9HA65 648 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ZNF334Q9HCZ1 680 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 VPS45Q9NRW7 570 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ZNHIT6Q9NWK9 470 aaKnown RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PPARGC1AQ9UBK2 798 aaKnown RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 TSPAN16Q9UKR8 245 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 RAI2Q9Y5P3 530 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 CKAP5Q14008 2032 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 EML5Q05BV3 1969 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LRRC53A6NM62 1247 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SIGLEC16A6NMB1 481 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 VSTM5A8MXK1 200 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SHISA8B8ZZ34 492 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 GOLGA6L19H0YKK7 550 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 H3BQ06 376 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 DDX3XO00571 662 aaKnown RBP eCLIP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ENC1O14682 589 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 IRAK2O43187 625 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 HSF2BPO75031 334 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PENKP01210 267 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 TMEM253P0C7T8 217 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 KLRC2P26717 231 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 L1CAMP32004 1257 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 HCAR3P49019 387 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 ARSEP51690 589 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PLK1P53350 603 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SLC5A3P53794 718 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SNRPNP63162 240 aaKnown RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SIM2Q14190 667 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LRRC32Q14392 662 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SETDB1Q15047 1291 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SLC18A3Q16572 532 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 TPD52L1Q16890 204 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 GOLGA7BQ2TAP0 167 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 HSF5Q4G112 596 aaPredicted RBP3.64□□□□□ -1.83
CCDC66-202ENST00000341455 BRMS1LQ5PSV4 323 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 PPM1LQ5SGD2 360 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 LRRC38Q5VT99 294 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 SFMBT2Q5VUG0 894 aa3.64□□□□□ -1.83
CCDC66-202ENST00000341455 C11orf63Q6NUN7 778 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms