RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 SERAC1Q96JX3 654 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 FCRL3Q96P31 734 aaPredicted RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 ERVW-1Q9UQF0 538 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 KALRNO60229 2985 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 TTC34A8MYJ7 566 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 WNT9AO14904 365 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 CETN3O15182 167 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 ADH1BP00325 375 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 LTFP02788 710 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 GOT1P17174 413 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 RGS7P49802 495 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 ADPRHP54922 357 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 NXPH1P58417 271 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 RPS24P62847 133 aaKnown RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 ILKQ13418 452 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 PKP1Q13835 747 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 DCAF17Q5H9S7 520 aaPredicted RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 LCLAT1Q6UWP7 414 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 AADATQ8N5Z0 425 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 UBR7Q8N806 425 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 LSM14AQ8ND56 463 aaKnown RBP11.91□□□□□ -0.5
CSMD2-202ENST00000338325 OR14C36Q8NHC7 312 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 SNX21Q969T3 373 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 MYEOVQ96EZ4 313 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 KIAA1257Q9ULG3 409 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 COQ4Q9Y3A0 265 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 RAI2Q9Y5P3 530 aa11.91□□□□□ -0.5
CSMD2-202ENST00000338325 PTPRQQ9UMZ3 2332 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 FAM237AA0A1B0GTK4 181 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 TLR4O00206 839 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 PIK3R2O00459 728 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 GABBR2O75899 941 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 MOCS3O95396 460 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 C5AR1P21730 350 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 TBXAS1P24557 533 aaPredicted RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 RXRGP48443 463 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 NDUFA8P51970 172 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 BNIP3Q12983 259 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 MS4A13Q5J8X5 152 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 SFMBT2Q5VUG0 894 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 RNF219Q5W0B1 726 aaPredicted RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 NAPEPLDQ6IQ20 393 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 PMF1Q6P1K2 205 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 MMS22LQ6ZRQ5 1243 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 CLEC4CQ8WTT0 213 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 SLC35F5Q8WV83 523 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 FCRL2Q96LA5 508 aaPredicted RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 SERPINB11Q96P15 392 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 FAM129BQ96TA1 746 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
CSMD2-202ENST00000338325 CEP83Q9Y592 693 aa11.9□□□□□ -0.5
CSMD2-202ENST00000338325 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.51
CSMD2-202ENST00000338325 DOCK9Q9BZ29 2069 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 ASH1LQ9NR48 2969 aaKnown RBP11.89□□□□□ -0.51
CSMD2-202ENST00000338325 M0QYV0 167 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 SLC16A3O15427 465 aaKnown RBP11.89□□□□□ -0.51
CSMD2-202ENST00000338325 LATO43561 262 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 FBXO21O94952 628 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 PAEPP09466 180 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
CSMD2-202ENST00000338325 PPP2CBP62714 309 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 PPP2CAP67775 309 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 ECT2LQ008S8 904 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 NNTQ13423 1086 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 DCAF6Q58WW2 860 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
CSMD2-202ENST00000338325 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 CFAP52Q8N1V2 620 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 STK40Q8N2I9 435 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 DQX1Q8TE96 717 aaKnown RBP11.89□□□□□ -0.51
CSMD2-202ENST00000338325 RFFLQ8WZ73 363 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 TFAP2BQ92481 460 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 TLR6Q9Y2C9 796 aa11.89□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3DA0A087WVF3 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3IA0A087WXS9 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3EA0A087X179 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3KA0A087X1G2 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3FA6NER0 549 aaPredicted RBP11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3LB9A6J9 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 BRINP1O60477 761 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 MAGEC1O60732 1142 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 IL1BP01584 269 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 TBC1D3HP0C7X1 549 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 CKMT2P17540 419 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 GLDCP23378 1020 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 ACTN2P35609 894 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 LRMPQ12912 555 aa11.88□□□□□ -0.51
CSMD2-202ENST00000338325 ELAVL3Q14576 367 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms