RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TNFRSF25Q93038 417 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 CLK4Q9HAZ1 481 aaKnown RBP16.4■□□□□ 0.22
NPHP3-201ENST00000337331 VPS51Q9UID3 782 aa16.4■□□□□ 0.22
NPHP3-201ENST00000337331 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CETPP11597 493 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 MAGP20916 626 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 PTPN7P35236 360 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 SULT2A1Q06520 285 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 DGKDQ16760 1214 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 TERB1Q8NA31 727 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 VCPIP1Q96JH7 1222 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 EHD1Q9H4M9 534 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 EFCAB1Q9HAE3 211 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 RABL2AQ9UBK7 228 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CDH22Q9UJ99 828 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 RALBP11234 206 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CDH8P55286 799 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 ANKRD13AQ8IZ07 590 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 GANCQ8TET4 914 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 PRR11Q96HE9 360 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF512Q96ME7 567 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 LRRC40Q9H9A6 602 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 AVENQ9NQS1 362 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 K7EPI3 171 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF197O14709 1029 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 SERPINI2O75830 405 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CYP1A1P04798 512 aaPredicted RBP16.39■□□□□ 0.21
NPHP3-201ENST00000337331 NR4A1P22736 598 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CGB2Q6NT52 195 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 SLC2A7Q6PXP3 512 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 CXorf21Q9HAI6 301 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 MAN1C1Q9NR34 630 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 THAP1Q9NVV9 213 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 POMPQ9Y244 141 aa16.39■□□□□ 0.21
NPHP3-201ENST00000337331 RRN3P2A6NIE6 340 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TRAFD1O14545 582 aaPredicted RBP16.38■□□□□ 0.21
NPHP3-201ENST00000337331 MEIS2O14770 477 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 JCHAINP01591 159 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 SERPINA6P08185 405 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 CCNA2P20248 432 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 IFNA8P32881 189 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 STX5Q13190 355 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TTC23LQ6PF05 361 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TMC7Q7Z402 723 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 CHSY1Q86X52 802 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 RAB26Q9ULW5 256 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 DCCP43146 1447 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 SUPT3HB4E1H0 165 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 ANXA9O76027 345 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 CALCAP01258 141 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TWF1Q12792 350 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 PNPLA3Q9NST1 481 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 DNAJB4Q9UDY4 337 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 PDE4DIPQ5VU43 2346 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 F8VP50 259 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 MYO1DO94832 1006 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 ABHD2P08910 425 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 AVPR1AP37288 418 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 LAMTOR4Q0VGL1 99 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 C16orf46Q6P387 395 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 LINC00523Q86TU6 105 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
NPHP3-201ENST00000337331 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
NPHP3-201ENST00000337331 FUOMA2VDF0 154 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 TIMM44O43615 452 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 APOA4P06727 396 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF423Q2M1K9 1284 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 PGS1Q32NB8 556 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 PIWIL2Q8TC59 973 aaKnown RBP16.38■□□□□ 0.21
NPHP3-201ENST00000337331 HTRA1Q92743 480 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 CPB2Q96IY4 423 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 RNF38Q9H0F5 515 aa16.38■□□□□ 0.21
NPHP3-201ENST00000337331 C16orf96A6NNT2 1141 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 KBTBD13C9JR72 458 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 ITM2AO43736 263 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CPA3P15088 417 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 SLC1A6P48664 564 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 WASHC5Q12768 1159 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 GLB1LQ6UWU2 654 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 STRA8Q7Z7C7 330 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 MAP4K3Q8IVH8 894 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 TNIP2Q8NFZ5 429 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CEP41Q9BYV8 373 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CYP3A43Q9HB55 503 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms