RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SAMD4BQ5PRF9 694 aaKnown RBP14.33□□□□□ -0.12
EPHB3-201ENST00000330394 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
EPHB3-201ENST00000330394 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 SMARCAD1Q9H4L7 1026 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 RHOBTB1O94844 696 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
EPHB3-201ENST00000330394 MPSTP25325 297 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 LDLRAP1Q5SW96 308 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 NKD2Q969F2 451 aaPredicted RBP14.33□□□□□ -0.12
EPHB3-201ENST00000330394 RMI1Q9H9A7 625 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 MRGBPQ9NV56 204 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 ZNF180Q9UJW8 692 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 DSEQ9UL01 958 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 DMTF1Q9Y222 760 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 A0A087WZ62 844 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 TRUB2O95900 331 aaKnown RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 ACADSBP45954 432 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 EMC10Q5UCC4 262 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 EDEM1Q92611 657 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 DLG3Q92796 817 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 CPNE1Q99829 537 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 FDXACB1Q9BRP7 624 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 POMKQ9H5K3 350 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 DMAC2Q9NW81 257 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 NDUFAF1Q9Y375 327 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 ASTN2O75129 1339 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 TCRBV7S3A2A0A539 114 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 SPTLC1O15269 473 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 H2AFYO75367 372 aaKnown RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 CFHP08603 1231 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 CARTPTQ16568 116 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 ATP6AP1LQ52LC2 224 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 MON1BQ7L1V2 547 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 DNAJB14Q8TBM8 379 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 NSMCE2Q96MF7 247 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 KCTD14Q9BQ13 255 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 COPG2Q9UBF2 871 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 MTSS1O43312 755 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 OR6B1O95007 311 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 MT-ND1P03886 318 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 SNHG28P0DPA3 235 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 PCNAP12004 261 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 GABRB2P47870 512 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 DEFA1P59665 94 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 DEFA3P59666 94 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 POU4F1Q01851 419 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 PLCL1Q15111 1095 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 RGS21Q2M5E4 152 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 PACS1Q6VY07 963 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 ZNF554Q86TJ5 538 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 CAMK1DQ8IU85 385 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 C12orf29Q8N999 325 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 SNX31Q8N9S9 440 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 MKL1Q969V6 931 aa14.32□□□□□ -0.12
EPHB3-201ENST00000330394 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-201ENST00000330394 FAM149AA5PLN7 773 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 TGDSO95455 350 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 HSMCR30P0CW71 290 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 ABL2P42684 1182 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 TDRPQ86YL5 185 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 FAR2Q96K12 515 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 APOL5Q9BWW9 433 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 HPS4Q9NQG7 708 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 NR2E3Q9Y5X4 410 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 NFAT5O94916 1531 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 KPNA4O00629 521 aaPredicted RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 HADHBP55084 474 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 LINC00523Q86TU6 105 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 CROCCP3Q8IVE0 287 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 DSELQ8IZU8 1212 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 DEFB106AQ8N104 65 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 FIG4Q92562 907 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 C7orf26Q96N11 449 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 CPXM1Q96SM3 734 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 BARX2Q9UMQ3 279 aaPredicted RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 SNCAIPQ9Y6H5 919 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 FAM208AQ9UK61 1670 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 MPOP05164 745 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 ATP5BP06576 529 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 MAGP20916 626 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 SLC7A2P52569 658 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 YWHAZP63104 245 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 GBE1Q04446 702 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 SAMD7Q7Z3H4 446 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 TBCBQ99426 244 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 SLC25A23Q9BV35 468 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 LIN28AQ9H9Z2 209 aaKnown RBP14.31□□□□□ -0.12
EPHB3-201ENST00000330394 MID1IP1Q9NPA3 183 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 ATAD3AQ9NVI7 634 aa14.31□□□□□ -0.12
EPHB3-201ENST00000330394 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms