RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 USP30Q70CQ3 517 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 TAC4Q86UU9 113 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 ST7Q9NRC1 585 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
TPT1-201ENST00000309246 ERVW-1Q9UQF0 538 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 TLR6Q9Y2C9 796 aa12.62□□□□□ -0.39
TPT1-201ENST00000309246 A0A1W2PPC4 97 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 PMM2O15305 246 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 TNFSF14O43557 240 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 PCDHGA12O60330 932 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 PSMD8P48556 350 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 C21orf59P57076 290 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 RACK1P63244 317 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 NNTQ13423 1086 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 PRAMEF14Q5SWL7 426 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 GATAD2AQ86YP4 633 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 APCDD1Q8J025 514 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 LGI2Q8N0V4 545 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 HNRNPLLQ8WVV9 542 aaKnown RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 OMDQ99983 421 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
TPT1-201ENST00000309246 NEUROG2Q9H2A3 272 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 EBF2Q9HAK2 575 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 FTSJ1Q9UET6 329 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 MAN1B1Q9UKM7 699 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 SCML1Q9UN30 329 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 SPEGQ15772 3267 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 ITIH6Q6UXX5 1313 aa12.61□□□□□ -0.39
TPT1-201ENST00000309246 URB1O60287 2271 aaKnown RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 ATRXP46100 2492 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 A0A1B0GTQ1 180 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 EDDM13A0A1B0GTR0 161 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 VILLO15195 856 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 APOEP02649 317 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 WNT1P04628 370 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 SLC8A1P32418 973 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 GPD2P43304 727 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 GCNT1Q02742 428 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 CETN1Q12798 172 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 KCNJ12Q14500 433 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 TTI2Q6NXR4 508 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 CHSY1Q86X52 802 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 STK40Q8N2I9 435 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 GTPBP4Q9BZE4 634 aaKnown RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 AASDHPPTQ9NRN7 309 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 SLCO3A1Q9UIG8 710 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
TPT1-201ENST00000309246 TDRD6O60522 2096 aaKnown RBP12.6□□□□□ -0.39
TPT1-201ENST00000309246 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 TARSL2A2RTX5 802 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 TRABD2BA6NFA1 517 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 CBX4O00257 560 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 CAPN9O14815 690 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 WNT9AO14904 365 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 P4HA2O15460 535 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 MOCS3O95396 460 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 SRPRAP08240 638 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 KRT5P13647 590 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 TACR2P21452 398 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ACADSBP45954 432 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 RPL34P49207 117 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 ECT2LQ008S8 904 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ARID5BQ14865 1188 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ACAP1Q15027 740 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 INAVAQ3KP66 663 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 RNF219Q5W0B1 726 aaPredicted RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 CIR1Q86X95 450 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms