RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 LGALS2P05162 132 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 PSMC3P17980 439 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 HDAC4P56524 1084 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 LENG1Q96BZ8 264 aaPredicted RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 NTPCRQ9BSD7 190 aaKnown RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 TKTL2Q9H0I9 626 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 EGFL7Q9UHF1 273 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 CPA4Q9UI42 421 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 MAP1BP46821 2468 aaKnown RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 A0A0A0MRY4 1105 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 STX16-NPEPL1H3BU86 382 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 FKBP6O75344 327 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 C2P06681 752 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 COX4I1P13073 169 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 BDNFP23560 247 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 CCR10P46092 362 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 GRIA4P48058 902 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 TTC33Q6PID6 262 aaPredicted RBP13.59□□□□□ -0.23
CASC4-201ENST00000299957 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 DCAKDQ8WVC6 231 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 SPATA13Q96N96 652 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 GAD1Q99259 594 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 CYP3A43Q9HB55 503 aa13.59□□□□□ -0.23
CASC4-201ENST00000299957 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 SIN3BO75182 1162 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 CHEK2O96017 543 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 CCNFP41002 786 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 TSPY1Q01534 308 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 KLF1Q13351 362 aaPredicted RBP13.58□□□□□ -0.23
CASC4-201ENST00000299957 PDK3Q15120 406 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 GNASQ5JWF2 1037 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 FRA10AC1Q70Z53 315 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 SPATA22Q8NHS9 363 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 URGCPQ8TCY9 931 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 LPPQ93052 612 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 MIPEPQ99797 713 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 ACE2Q9BYF1 805 aaPredicted RBP13.58□□□□□ -0.23
CASC4-201ENST00000299957 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.23
CASC4-201ENST00000299957 LRP6O75581 1613 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 NEMP2A6NFY4 417 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 ARIH2O95376 493 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 LYNP07948 512 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 LAMC2Q13753 1193 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CGB2Q6NT52 195 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 RPS27LQ71UM5 84 aaKnown RBP13.58□□□□□ -0.24
CASC4-201ENST00000299957 OTOP3Q7RTS5 596 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CCDC117Q8IWD4 279 aaPredicted RBP13.58□□□□□ -0.24
CASC4-201ENST00000299957 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 SLC7A6OSQ96CW6 309 aaPredicted RBP13.58□□□□□ -0.24
CASC4-201ENST00000299957 FRMD8Q9BZ67 464 aaPredicted RBP13.58□□□□□ -0.24
CASC4-201ENST00000299957 HAPLN2Q9GZV7 340 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CCDC134Q9H6E4 229 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CHRNGP07510 517 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CPB1P15086 417 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 IL10P22301 178 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 ALDH1A3P47895 512 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 AQP4P55087 323 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 PPP1R15BQ5SWA1 713 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 WDR41Q9HAD4 459 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 XPR1Q9UBH6 696 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 PSAT1Q9Y617 370 aa13.58□□□□□ -0.24
CASC4-201ENST00000299957 ITGB6P18564 788 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CCR1P32246 355 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ARL2P36404 184 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 TUBGCP5Q96RT8 1024 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 PEBP4Q96S96 227 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ZNF839A8K0R7 811 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 INPP4BO15327 924 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SORBS2O94875 1100 aaKnown RBP13.57□□□□□ -0.24
CASC4-201ENST00000299957 ZNF23P17027 643 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 PGAM1P18669 254 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 NEDD8Q15843 81 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 KIAA1841Q6NSI8 718 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 TTC39CQ8N584 583 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CDCA5Q96FF9 252 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 FBXL18Q96ME1 805 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 OR12D3Q9UGF7 316 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CILPO75339 1184 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 RGS20O76081 388 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SRP72O76094 671 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms