RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ACTR3P61158 418 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 AP2B1P63010 937 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KLC1Q07866 573 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 GALNT2Q10471 571 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PCLAFQ15004 111 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RAB41Q5JT25 222 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TAF2Q6P1X5 1199 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RFWD3Q6PCD5 774 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 LRRC74BQ6ZQY2 392 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CLEC20AQ6ZU45 233 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 LINC00523Q86TU6 105 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TTC7BQ86TV6 843 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CCDC117Q8IWD4 279 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KLHDC8BQ8IXV7 354 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 C2orf69Q8N8R5 385 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CCNYQ8ND76 341 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 OR6Y1Q8NGX8 325 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 JADE3Q92613 823 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CMTM5Q96DZ9 223 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PPP1R10Q96QC0 940 aaKnown RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 IL22Q9GZX6 179 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 SYBUQ9NX95 663 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KLHL8Q9P2G9 620 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 COPG2Q9UBF2 871 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 FBXW11Q9UKB1 542 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 VANGL2Q9ULK5 521 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 HES2Q9Y543 173 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RPS6KL1Q9Y6S9 549 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CCDC195A0A1B0GUA6 201 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CAPN9O14815 690 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 MAP3K7O43318 606 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ENO1P06733 434 aaKnown RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 AKAP5P24588 427 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PTPN3P26045 913 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 HOXC8P31273 242 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 GRIA1P42261 906 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 DAOAP59103 153 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ABCE1P61221 599 aaKnown RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PRPSAP1Q14558 356 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 GSTA3Q16772 222 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 HSF5Q4G112 596 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RABGAP1LQ5R372 815 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 OSTM1Q86WC4 334 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PYROXD2Q8N2H3 581 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RBM15BQ8NDT2 890 aaKnown RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 MED10Q9BTT4 135 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CXCL16Q9H2A7 254 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 VCXQ9H320 206 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 VCX3BQ9H321 246 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 MRGBPQ9NV56 204 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CDH9Q9ULB4 789 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 GINS2Q9Y248 185 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 DNAJC16Q9Y2G8 782 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PCDHB12Q9Y5F1 795 aa10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 FNDC1Q4ZHG4 1894 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-201ENST00000297350 A6NHS1 94 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KPNA6O60684 536 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 C6orf222P0C671 652 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 SRGAP2BP0DMP2 458 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RALBP11234 206 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CPA3P15088 417 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PCSK1P29120 753 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 RPL9P32969 192 aaKnown RBP10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TKTL1P51854 596 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ILF2Q12905 390 aaKnown RBP10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KCTD11Q693B1 232 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 NAPEPLDQ6IQ20 393 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PID1Q7Z2X4 250 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TLK2Q86UE8 772 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TREML1Q86YW5 311 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ULK2Q8IYT8 1036 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TSGA13Q96PP4 275 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 KRT82Q9NSB4 513 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 PIGVQ9NUD9 493 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 NMRK1Q9NWW6 199 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ARMCX1Q9P291 453 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 GJD2Q9UKL4 321 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 H0Y3Z8 333 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CREB3O43889 395 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 COL6A2P12110 1019 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ERCC2P18074 760 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CYP2B6P20813 491 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 COPAP53621 1224 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 IRX4P78413 519 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 XIAPP98170 497 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 SOX4Q06945 474 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TMEM62Q0P6H9 643 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 ASPHQ12797 758 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 TUBB3Q13509 450 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 HIC1Q14526 733 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 UGP2Q16851 508 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
TNFRSF11B-201ENST00000297350 CAPRIN2Q6IMN6 1127 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms