RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 CCNA2P20248 432 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SLC16A1P53985 500 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 SEPT5Q99719 369 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-201ENST00000296302 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
PBRM1-201ENST00000296302 VAPBO95292 243 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CDH3P22223 829 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GLRA2P23416 452 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SLC26A2P50443 739 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ALDH6A1Q02252 535 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ISLR2Q6UXK2 745 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CLNKQ7Z7G1 428 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 BRSK2Q8IWQ3 736 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GIPC3Q8TF64 312 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 KAT2BQ92831 832 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ACOX2Q99424 681 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GINS4Q9BRT9 223 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 HDHD2Q9H0R4 259 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PRR23AA6NEV1 266 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 HDAC3O15379 428 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ALOX5P09917 674 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TPH1P17752 444 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 LBPP18428 481 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 AMPD1P23109 780 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GRIA3P42263 894 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MARCKSL1P49006 195 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF135P52742 658 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ST8SIA6P61647 398 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 BNIP2Q12982 314 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TYW3Q6IPR3 259 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ADCY4Q8NFM4 1077 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 APBA2Q99767 749 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CLUHO75153 1309 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 F5H5T6 163 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SNPHO15079 494 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 RAD51BO15315 384 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MICAL2O94851 1124 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 HMGCRP04035 888 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 COX10Q12887 443 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 LIN52Q52LA3 116 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MFSD14CQ5VZR4 134 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GLB1LQ6UWU2 654 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF605Q86T29 641 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CDH24Q86UP0 819 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 LZTR1Q8N653 840 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CAPSLQ8WWF8 208 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TCF12Q99081 682 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 UNKQ9C0B0 810 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PRG3Q9Y2Y8 225 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CNTNAP4Q9C0A0 1308 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 EFCAB10A6NFE3 127 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 H0YC42 278 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CSPG5O95196 566 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 LCA5LO95447 670 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SEC24AO95486 1093 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ETS2P15036 469 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PSMA3P25788 255 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 GABRB2P47870 512 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CSE1LP55060 971 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PQLC1Q8N2U9 271 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SPPL2AQ8TCT8 520 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NT5MQ9NPB1 228 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 KCNQ5Q9NR82 932 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TAS2R13Q9NYV9 303 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 RAP2CQ9Y3L5 183 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NAGLUP54802 743 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms