RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 VPS45Q9NRW7 570 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 VANGL2Q9ULK5 521 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SIK3Q9Y2K2 1263 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 PCDHGA5Q9Y5G8 931 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 CEP250Q9BV73 2442 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 GON4LQ3T8J9 2241 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 SYCE3A1L190 88 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 AP5Z1O43299 807 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 IGLV3-25P01717 112 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 ACADMP11310 421 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 CCR1P32246 355 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 FLT3P36888 993 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 STAT1P42224 750 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 STK19P49842 368 aaPredicted RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 MMP16P51512 607 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 SNX16P57768 344 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 NOMO3P69849 1222 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 ATP11AP98196 1134 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 DEUP1Q05D60 604 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 BYSLQ13895 437 aaKnown RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 NCAPHQ15003 741 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PTPRNQ16849 979 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 CDO1Q16878 200 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 UAP1L1Q3KQV9 507 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 TRIM61Q5EBN2 209 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PITRM1Q5JRX3 1037 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 RNF219Q5W0B1 726 aaPredicted RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 IL31Q6EBC2 164 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 XYLT1Q86Y38 959 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 EMC1Q8N766 993 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 MSANTD4Q8NCY6 345 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 GANCQ8TET4 914 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 DDX1Q92499 740 aaKnown RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PRCCQ92733 491 aaPredicted RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 C18orf8Q96DM3 657 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 SIPA1Q96FS4 1042 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 GPR174Q9BXC1 333 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 CD248Q9HCU0 757 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PIGVQ9NUD9 493 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 ASNSD1Q9NWL6 643 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 LIMA1Q9UHB6 759 aaKnown RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 SLC12A6Q9UHW9 1150 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 NOCTQ9UK39 431 aaKnown RBP10.1□□□□□ -0.79
CCDC58-201ENST00000291458 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 HS3ST4Q9Y661 456 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 PI4KAP42356 2102 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 CFAP54Q96N23 3096 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 SPTBN4Q9H254 2564 aa10.1□□□□□ -0.79
CCDC58-201ENST00000291458 TP53BP1Q12888 1972 aaPredicted RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 LNP1A1A4G5 178 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 KCNU1A8MYU2 1149 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 KHNYNO15037 678 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 BNIP3LO60238 219 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 ZNF217O75362 1048 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 PAGE1O75459 146 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 ATP5BP06576 529 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 GLI1P08151 1106 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 ZNF18P17022 549 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 MAOBP27338 520 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 NOS2P35228 1153 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 MATKP42679 507 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 COPAP53621 1224 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 JAM2P57087 298 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 ST8SIA6P61647 398 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 FMO1Q01740 532 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 ZNF33AQ06730 810 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 RAB6CQ53S08 254 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 RABGAP1LQ5R372 815 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 TRNP1Q6NT89 227 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 SND1Q7KZF4 910 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 FAM131BQ86XD5 332 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 SLC41A1Q8IVJ1 513 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 OR2I1PQ8NGU4 316 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 IGSF8Q969P0 613 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 TOE1Q96GM8 510 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 RTKNQ9BST9 563 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 NAT10Q9H0A0 1025 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 TKTL2Q9H0I9 626 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 RAB6CQ9H0N0 254 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 MIR1-1HGQ9H1L0 117 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 HSD3B7Q9H2F3 369 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 TMEM74BQ9NUR3 256 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms