RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CALM2P0DP24 149 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CALM3P0DP25 149 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 EEF1DP29692 281 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HOXA7P31268 230 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 LEPRP48357 1165 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CLCNKBP51801 687 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 OCA2Q04671 838 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SLC18A2Q05940 514 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 FAAP100Q0VG06 881 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SLC13A2Q13183 592 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 COG2Q14746 738 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 MAPK11Q15759 364 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 NEDD8Q15843 81 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 LETM2Q2VYF4 491 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 C6orf10Q5SRN2 563 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SHEQ5VZ18 495 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 TFAP2CQ92754 450 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CFAP36Q96G28 342 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 APOL6Q9BWW8 343 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 EIF3LQ9Y262 564 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 AP3M1Q9Y2T2 418 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 PCDHA2Q9Y5H9 948 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CLUHO75153 1309 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 MYO3BQ8WXR4 1341 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 VWA5AO00534 786 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CYB561D2O14569 222 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 AKAP10O43572 662 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 MAN1A2O60476 641 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 USP12O75317 370 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 GYG1P46976 350 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HCAR3P49019 387 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 VAC14Q08AM6 782 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 KIAA1841Q6NSI8 718 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HAUS6Q7Z4H7 955 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 FAM109AQ8N4B1 249 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SIMC1Q8NDZ2 872 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ZFP90Q8TF47 636 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 JPH3Q8WXH2 748 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HDAC2Q92769 488 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CELF1Q92879 486 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 RMDN3Q96TC7 470 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 TM9SF2Q99805 663 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ACAT2Q9BWD1 397 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 LRP2BPQ9P2M1 347 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 RNF103O00237 685 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 LRRN2O75325 713 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CCNKO75909 580 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 EPN2O95208 641 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 FGFR3P22607 806 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 L1CAMP32004 1257 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ECE1P42892 770 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 POLD2P49005 469 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 TNK2Q07912 1038 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ALCAMQ13740 583 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SELPLGQ14242 412 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HERC3Q15034 1050 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 TAF5Q15542 800 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CCDC60Q8IWA6 550 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ADGRG5Q8IZF4 528 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 TP53I13Q8NBR0 393 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 OR2T3Q8NH03 318 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SLC20A1Q8WUM9 679 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 ANKRD49Q8WVL7 239 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SLC35C1Q96A29 364 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 SLC39A13Q96H72 371 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 CNDP2Q96KP4 475 aaKnown RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 HEMGNQ9BXL5 484 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 GPN2Q9H9Y4 310 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-201ENST00000274071 PKD2L1Q9P0L9 805 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 DGKBQ9Y6T7 804 aa9.42□□□□□ -0.9
PDGFC-201ENST00000274071 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 A0A0X1KG70 313 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 A0A1W2PQ72 361 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 SNNO75324 88 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 AKAP3O75969 853 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 KCNK2O95069 426 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 ZSCAN5DPP0CG00 497 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 MX2P20592 715 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 MRPS15P82914 257 aaKnown RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 BFSP2Q13515 415 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 PPP1R3AQ16821 1122 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
PDGFC-201ENST00000274071 CHST15Q7LFX5 561 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-201ENST00000274071 GSTA5Q7RTV2 222 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms