RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TCTEX1D2Q8WW35 142 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MAFIPQ8WZ33 124 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 JAG2Q9Y219 1238 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 COPEO14579 308 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PTPN2P17706 415 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 HLA-DPA1P20036 260 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 RAB3AP20336 220 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ENPP1P22413 925 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CEBPGP53567 150 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MAPK10P53779 464 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NLRP11P59045 1033 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 B2MP61769 119 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 SUSD4Q5VX71 490 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIQKQ629K1 86 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 HAGHLQ6PII5 290 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 HAUS6Q7Z4H7 955 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM228AQ86W67 206 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ATPAF2Q8N5M1 289 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 POU5F2Q8N7G0 328 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OLA1Q9NTK5 396 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ADPRHL2Q9NX46 363 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ADGRE2Q9UHX3 823 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ACSL5Q9ULC5 683 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PALD1Q9ULE6 856 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 DUSP12Q9UNI6 340 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 USP20Q9Y2K6 914 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ADGRA2Q96PE1 1338 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MYO5BQ9ULV0 1848 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 AQP9O43315 295 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 RAD51CO43502 376 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PALMO75781 387 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 DGKIO75912 1065 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NR3C2P08235 984 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ADORA1P30542 326 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 LIMK1P53667 647 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 AIF1P55008 147 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 INHBCP55103 352 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OTOP3Q7RTS5 596 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CAMKK1Q8N5S9 505 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 AMER2Q8N7J2 671 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TRUB1Q8WWH5 349 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 SYMPKQ92797 1274 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PLA2G12BQ9BX93 195 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OSBPL11Q9BXB4 747 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ZC3H4Q9UPT8 1303 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TFECO14948 347 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 SHOXO15266 292 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 FOXP2O15409 715 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NIPSNAP2O75323 286 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MYL2P10916 166 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CTRB1P17538 263 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MSH3P20585 1137 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 GYG1P46976 350 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 TSTA3Q13630 321 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CALCRLQ16602 461 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF827Q17R98 1081 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC27A3Q5K4L6 730 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 BNIPLQ7Z465 357 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 KBTBD6Q86V97 674 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OR5T2Q8NGG2 359 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MTG1Q9BT17 334 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 HIPK3Q9H422 1215 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 OSGEPL1Q9H4B0 414 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NARFQ9UHQ1 456 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF175Q9Y473 711 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 CSADQ9Y600 493 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 KPNA7A9QM74 516 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PRKAR1AP10644 381 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PSMC2P35998 433 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 FLI1Q01543 452 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 BNIP2Q12982 314 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 EFL1Q7Z2Z2 1120 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 EIF1ADQ8N9N8 165 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 DPF2Q92785 391 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 QRSL1Q9H0R6 528 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 ABI2Q9NYB9 513 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 PCDHB6Q9Y5E3 794 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 NEDD4P46934 1319 aa6.88□□□□□ -1.31
PDGFRA-201ENST00000257290 MIF4GDA9UHW6 222 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TSTD3H0UI37 97 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 OIP5O43482 229 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 BBOX1O75936 387 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 KCNH1O95259 989 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 FGGP02679 453 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 FCER2P06734 321 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 NOMO3P69849 1222 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 NOMO1Q15155 1222 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PITRM1Q5JRX3 1037 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 BROXQ5VW32 411 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PAOXQ6QHF9 649 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 COMTD1Q86VU5 262 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms