RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 SDCCAG8Q86SQ7 713 aaPredicted RBP16.09■□□□□ 0.17
RFX1-201ENST00000254325 FICDQ9BVA6 458 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 ARMCX1Q9P291 453 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 DNAJC16Q9Y2G8 782 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 C2CD2LO14523 706 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
RFX1-201ENST00000254325 BAG2O95816 211 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 SUGP1Q8IWZ8 645 aaKnown RBP16.09■□□□□ 0.17
RFX1-201ENST00000254325 DQX1Q8TE96 717 aaKnown RBP16.09■□□□□ 0.17
RFX1-201ENST00000254325 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 SLC9A7Q96T83 725 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 VAT1Q99536 393 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 ABCC13Q9NSE7 274 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 CPSF2Q9P2I0 782 aaKnown RBP16.09■□□□□ 0.17
RFX1-201ENST00000254325 FBXW11Q9UKB1 542 aa16.09■□□□□ 0.17
RFX1-201ENST00000254325 FCHO1O14526 889 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 LRIG2O94898 1065 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 CCND1P24385 295 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 PGM1P36871 562 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.17
RFX1-201ENST00000254325 C10orf120Q5SQS8 335 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 TFAP2DQ7Z6R9 452 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 TAC4Q86UU9 113 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 KCNMB4Q86W47 210 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 BBS5Q8N3I7 341 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.17
RFX1-201ENST00000254325 MIOSQ9NXC5 875 aa16.08■□□□□ 0.17
RFX1-201ENST00000254325 RASSF9O75901 435 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ERFP50548 548 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 SIGLEC10Q96LC7 697 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ATXN3LQ9H3M9 355 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 CHKBQ9Y259 395 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 L3MBTL1Q9Y468 752 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ZNF487B1APH4 448 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 ITGA2BP08514 1039 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ARL1P40616 181 aaPredicted RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 ZNF135P52742 658 aaPredicted RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 PRKCZQ05513 592 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ITGA7Q13683 1181 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 UGP2Q16851 508 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 RNF135Q8IUD6 432 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 AFAP1L2Q8N4X5 818 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 CPNE1Q99829 537 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ACBD6Q9BR61 282 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 PAAF1Q9BRP4 392 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 FAM96AQ9H5X1 160 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 AGO3Q9H9G7 860 aaKnown RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 SLC17A6Q9P2U8 582 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 HAS3O00219 553 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 TIMM44O43615 452 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 PTPN4P29074 926 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 GEMP55040 296 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 GRTP1Q5TC63 336 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 DCLRE1AQ6PJP8 1040 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 ZNF398Q8TD17 642 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 FBXO32Q969P5 355 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 FBXO6Q9NRD1 293 aaPredicted RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
RFX1-201ENST00000254325 NME7Q9Y5B8 376 aa16.08■□□□□ 0.16
RFX1-201ENST00000254325 CITO14578 2027 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 CPA3P15088 417 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 PTPN3P26045 913 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 NPY2RP49146 381 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 TAF11Q15544 211 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 KYAT3Q6YP21 454 aaKnown RBP16.07■□□□□ 0.16
RFX1-201ENST00000254325 SCAMP5Q8TAC9 235 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 CENPIQ92674 756 aaPredicted RBP16.07■□□□□ 0.16
RFX1-201ENST00000254325 SPON2Q9BUD6 331 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 ERI2A8K979 691 aaKnown RBP16.07■□□□□ 0.16
RFX1-201ENST00000254325 RALBP11234 206 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 AVPR1AP37288 418 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 ETFBP38117 255 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
RFX1-201ENST00000254325 KPNA2P52292 529 aaKnown RBP16.07■□□□□ 0.16
RFX1-201ENST00000254325 HIC1Q14526 733 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 AGMOQ6ZNB7 445 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 PPP1R36Q96LQ0 422 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 ALDH1A1P00352 501 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 ITGA9Q13797 1035 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 CST9Q5W186 159 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 ARCQ7LC44 396 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 VPS39Q96JC1 886 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 UROC1Q96N76 676 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 STARD7Q9NQZ5 370 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 THAP1Q9NVV9 213 aa16.07■□□□□ 0.16
RFX1-201ENST00000254325 MYO18AQ92614 2054 aaKnown RBP16.06■□□□□ 0.16
RFX1-201ENST00000254325 MAGEB16A2A368 324 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 SLC2A3P11169 496 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 GLUD2P49448 558 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 PRAMEP78395 509 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 NAB1Q13506 487 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 IFT43Q96FT9 208 aa16.06■□□□□ 0.16
RFX1-201ENST00000254325 GABRQQ9UN88 632 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms