RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PSMB7Q99436 277 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 SIK2Q9H0K1 926 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 NDFIP2Q9NV92 336 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 MBD1Q9UIS9 605 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-201ENST00000230480 SLC8A2Q9UPR5 921 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 INVSQ9Y283 1065 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 TBC1D30Q9Y2I9 924 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 DOCK9Q9BZ29 2069 aa14.17□□□□□ -0.14
VEGFA-201ENST00000230480 AXIN1O15169 862 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 APBB3O95704 486 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 CCDC172P0C7W6 258 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 HLA-EP13747 358 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 TCF4P15884 667 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 ABCB4P21439 1286 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 GPD1P21695 349 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 BCKDHBP21953 392 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
VEGFA-201ENST00000230480 CSKP41240 450 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 COPAP53621 1224 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 ADKP55263 362 aaKnown RBP14.16□□□□□ -0.14
VEGFA-201ENST00000230480 SEMA3BQ13214 749 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 CDO1Q16878 200 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 PITRM1Q5JRX3 1037 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 ANO7Q6IWH7 933 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 MFN1Q8IWA4 741 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 DRC7Q8IY82 874 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 ZNF366Q8N895 744 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 FAM172AQ8WUF8 416 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 RLN3Q8WXF3 142 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 EXOC4Q96A65 974 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 MCEEQ96PE7 176 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 HAPLN3Q96S86 360 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 TPSD1Q9BZJ3 242 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 MKRN2Q9H000 416 aaKnown RBP14.16□□□□□ -0.14
VEGFA-201ENST00000230480 MPP6Q9NZW5 540 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 SLCO3A1Q9UIG8 710 aa14.16□□□□□ -0.14
VEGFA-201ENST00000230480 F5H5T6 163 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 MFAP3LO75121 409 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 HOXB2P14652 356 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 NDUFV2P19404 249 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 SDC4P31431 198 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 DGKEP52429 567 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 NRG1Q02297 640 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 EIF4HQ15056 248 aaKnown RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 CA9Q16790 459 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 PLEKHG6Q3KR16 790 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 EOGTQ5NDL2 527 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 DNAJC24Q6P3W2 148 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 KBTBD6Q86V97 674 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 CHPFQ8IZ52 775 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 FAM160A2Q8N612 972 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 TC2NQ8N9U0 490 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 MSANTD4Q8NCY6 345 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 TSTD1Q8NFU3 115 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 WFIKKN2Q8TEU8 576 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 GAB3Q8WWW8 586 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 NKD2Q969F2 451 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 RNF34Q969K3 372 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 IQCDQ96DY2 449 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 DDX50Q9BQ39 737 aaKnown RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 CNPY3Q9BT09 278 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 SELENOOQ9BVL4 669 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 PACSIN1Q9BY11 444 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 THAP2Q9H0W7 228 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 OSBPL2Q9H1P3 480 aa14.15□□□□□ -0.14
VEGFA-201ENST00000230480 DUSP15Q9H1R2 295 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 CNOT8Q9UFF9 292 aaKnown RBP14.15□□□□□ -0.14
VEGFA-201ENST00000230480 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.15□□□□□ -0.148e-8■□□□□ 9.1
VEGFA-201ENST00000230480 A0A0D9SEW6 157 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 A0A1B0GVM2 712 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 TCAF2A6NFQ2 919 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 C10orf142B7Z368 130 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 E9PAM4 449 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 RNF103O00237 685 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 TIMM44O43615 452 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 ZMPSTE24O75844 475 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 CD160O95971 181 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 CYP1A2P05177 515 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 DLDP09622 509 aaKnown RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 P2RY2P41231 377 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 ZNF75DP51815 510 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 NRLP54845 237 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 GFPT1Q06210 699 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 SCAPQ12770 1279 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 CAMK2GQ13555 558 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 LPAL2Q16609 132 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 AHI1Q8N157 1196 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 OR8K1Q8NGG5 319 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 NTAN1Q96AB6 310 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 ZC3H10Q96K80 434 aaKnown RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 MRGPRX1Q96LB2 322 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 RPRD1AQ96P16 312 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-201ENST00000230480 FEM1AQ9BSK4 669 aa14.14□□□□□ -0.15
VEGFA-201ENST00000230480 CIPCQ9C0C6 399 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms