RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 BIKQ13323 160 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 SLC26A11Q86WA9 606 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ZDHHC17Q8IUH5 632 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CACTIN-AS1Q8N1I8 211 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 OSGEPQ9NPF4 335 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 KLF15Q9UIH9 416 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 PGAM1P18669 254 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 LRRC74BQ6ZQY2 392 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 P2RX7Q99572 595 aaKnown RBP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 EHD4Q9H223 541 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CXCL11O14625 94 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 BTBD9Q96Q07 612 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CATSPERZQ9NTU4 200 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 VTI1BQ9UEU0 232 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 SERPINA4P29622 427 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 NTSP30990 170 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 MMP13P45452 471 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CDH8P55286 799 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 TRIM16LQ309B1 348 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CCDC149Q6ZUS6 474 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 GAKO14976 1311 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 RGS14O43566 566 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CRABP2P29373 138 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 RASA2Q15283 850 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 N4BP2L1Q5TBK1 243 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CEP68Q76N32 757 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 SYT12Q8IV01 421 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 OLFM1Q99784 485 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 SATB2Q9UPW6 733 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 NFASCO94856 1347 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 MEI4A8MW99 385 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 UQCRBP14927 111 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 RAET1GQ6H3X3 334 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 TAF2Q6P1X5 1199 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 DEFB106AQ8N104 65 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ZSCAN18Q8TBC5 510 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CPNE1Q99829 537 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 USP20Q9Y2K6 914 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 TGFB3P10600 412 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CLK3P49761 638 aaKnown RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CRY1Q16526 586 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CCDC153Q494R4 210 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ABRAQ8N0Z2 381 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 NOA1Q8NC60 698 aaKnown RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 HTR3CQ8WXA8 447 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 HGH1Q9BTY7 390 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 SLC40A1Q9NP59 571 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 TSC22D4Q9Y3Q8 395 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 AP4S1Q9Y587 144 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 TAF6LQ9Y6J9 622 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 PSMB9P28065 219 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 NPY2RP49146 381 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 PRAMEF19Q5SWL8 479 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF470Q6ECI4 717 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF621Q6ZSS3 439 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 DNAAF5Q86Y56 855 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 CXorf40BQ96DE9 158 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 PABPC3Q9H361 631 aaKnown RBP13.49□□□□□ -0.25
COL1A1-201ENST00000225964 SHOC2Q9UQ13 582 aa13.49□□□□□ -0.25
COL1A1-201ENST00000225964 UMODL1Q5DID0 1318 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SCAMP3O14828 347 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ALG11Q2TAA5 492 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SCARA3Q6AZY7 606 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ANKRD6Q9Y2G4 727 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 TBL1XO60907 577 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 NFKB1P19838 968 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 GRK2P25098 689 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 IFNGR2P38484 337 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ELMO1Q92556 727 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 PROX1Q92786 737 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 TMEM150BA6NC51 233 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 FCGR1AP12314 374 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 PRKAG1P54619 331 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 CCL23P55773 120 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 TSNQ15631 228 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 MIIPQ5JXC2 388 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SRLQ86TD4 932 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 GPSM1Q86YR5 675 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 DENND6AQ8IWF6 608 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 KLHL4Q9C0H6 718 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ABCC13Q9NSE7 274 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 TNFSF13BQ9Y275 285 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms