RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CXCR2P25025 360 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 KRT17Q04695 432 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 RALGDSQ12967 914 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 SEZ6Q53EL9 994 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 CPA5Q8WXQ8 436 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF512Q96ME7 567 aaPredicted RBP13.96□□□□□ -0.18
GABPB1-201ENST00000220429 DCLK3Q9C098 648 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.18
GABPB1-201ENST00000220429 CORINQ9Y5Q5 1042 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 MAFO75444 373 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 CPOXP36551 454 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 LSM12Q3MHD2 195 aaKnown RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 FAM160B1Q5W0V3 765 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 PLEKHA7Q6IQ23 1121 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 GPR141Q7Z602 305 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 SLC15A4Q8N697 577 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 SEPT1Q8WYJ6 367 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 DCPSQ96C86 337 aaKnown RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 HERC2P3Q9BVR0 1158 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 ANKMY1Q9P2S6 941 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 PPARGC1AQ9UBK2 798 aaKnown RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 EVPLQ92817 2033 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 MGAMO43451 1857 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 POC1B-GALNT4F8VUJ3 575 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 NDST2P52849 883 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 EPHB1P54762 984 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 TPTEP56180 551 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 CAV1Q03135 178 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 HSPA14Q0VDF9 509 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 LLGL2Q6P1M3 1020 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 CENPUQ71F23 418 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 PRPF39Q86UA1 669 aaKnown RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF677Q86XU0 584 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 SLC13A5Q86YT5 568 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 TOR1AIP2Q8NFQ8 470 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 BRSK1Q8TDC3 778 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 VPS11Q9H270 941 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 TP63Q9H3D4 680 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 MOV10Q9HCE1 1003 aaKnown RBP13.95□□□□□ -0.18
GABPB1-201ENST00000220429 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
GABPB1-201ENST00000220429 A0A1W2PPM1 405 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 SOCS7O14512 581 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 B4GALT4O60513 344 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TSPAN9O75954 239 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ATE1O95260 518 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 PGK2P07205 417 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CFHP08603 1231 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TGFB3P10600 412 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CUL2Q13617 745 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TUBA3CQ13748 450 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 SIX1Q15475 284 aaPredicted RBP13.94□□□□□ -0.18
GABPB1-201ENST00000220429 C2CD6Q53TS8 623 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CEP78Q5JTW2 689 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 RARS2Q5T160 578 aaKnown RBP13.94□□□□□ -0.18
GABPB1-201ENST00000220429 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 KIAA2013Q8IYS2 634 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 MROQ9BYG7 248 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ANAPC5Q9UJX4 755 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CPQQ9Y646 472 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 SYCE1LA8MT33 242 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 MEI4A8MW99 385 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 HAT1O14929 419 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 GABBR2O75899 941 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 C8BP07358 591 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 RRM1P23921 792 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 HSPA13P48723 471 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ESRRGP62508 458 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CTBSQ01459 385 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CENPCQ03188 943 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 SGO2Q562F6 1265 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 AGAP7PQ5VUJ5 663 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CYP4F22Q6NT55 531 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TAS2R42Q7RTR8 314 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 CCDC124Q96CT7 223 aaKnown RBP13.94□□□□□ -0.18
GABPB1-201ENST00000220429 SLC2A11Q9BYW1 496 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 TXNRD2Q9NNW7 524 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 PCDH12Q9NPG4 1184 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 AVENQ9NQS1 362 aaPredicted RBP13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 ANGPTL3Q9Y5C1 460 aa13.94□□□□□ -0.18
GABPB1-201ENST00000220429 GOLGA8MH3BSY2 632 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 IDH3BO43837 385 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 H6PDO95479 791 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ABHD2P08910 425 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 PRKCAP17252 672 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 PSMC3P17980 439 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 CES1P23141 567 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 MAPK4P31152 587 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms