RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 BEND5Q7L4P6 421 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 TMPRSS12Q86WS5 348 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 MMAAQ8IVH4 418 aaKnown RBP16.32■□□□□ 0.2
NME3-201ENST00000219302 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 CFAP52Q8N1V2 620 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 CARNMT1Q8N4J0 409 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 OR2T34Q8NGX1 318 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
NME3-201ENST00000219302 LRIG1Q96JA1 1093 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 NT5C1BQ96P26 610 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
NME3-201ENST00000219302 FTSJ1Q9UET6 329 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 XPO7Q9UIA9 1087 aaKnown RBP16.32■□□□□ 0.2
NME3-201ENST00000219302 FZD4Q9ULV1 537 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 PCDHGA1Q9Y5H4 931 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
NME3-201ENST00000219302 ARID1BQ8NFD5 2236 aaPredicted RBP16.31■□□□□ 0.2
NME3-201ENST00000219302 LRRC72A6NJI9 287 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 E9PAM4 449 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 LUC7L3O95232 432 aaKnown RBP16.31■□□□□ 0.2
NME3-201ENST00000219302 CCR5P51681 352 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 CCDC157Q569K6 752 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 SYPL2Q5VXT5 272 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 APCDD1Q8J025 514 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 AADATQ8N5Z0 425 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 SAP25Q8TEE9 199 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 PTPRN2Q92932 1015 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 SERPINB11Q96P15 392 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
NME3-201ENST00000219302 EDDM13A0A1B0GTR0 161 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 CBX4O00257 560 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 RNASEH2AO75792 299 aaKnown RBP16.3■□□□□ 0.2
NME3-201ENST00000219302 GOT1P17174 413 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 CD38P28907 300 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
NME3-201ENST00000219302 CDH18Q13634 790 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 INAVAQ3KP66 663 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 TAC4Q86UU9 113 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 STK40Q8N2I9 435 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 TSC1Q92574 1164 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 SKA1Q96BD8 255 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 CEP63Q96MT8 703 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 OMDQ99983 421 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 CNTN6Q9UQ52 1028 aa16.3■□□□□ 0.2
NME3-201ENST00000219302 BPTFQ12830 3046 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 COL5A1P20908 1838 aaPredicted RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 ENC1O14682 589 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 P4HA2O15460 535 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 LDOC1O95751 146 aaPredicted RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 C5AR1P21730 350 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 RXRGP48443 463 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 GCNT1Q02742 428 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 SND1Q7KZF4 910 aaKnown RBP eCLIP16.29■□□□□ 0.26e-7■■□□□ 12.7
NME3-201ENST00000219302 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 LGI2Q8N0V4 545 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 FAM131CQ96AQ9 280 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 RPL10LQ96L21 214 aaKnown RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 GTPBP4Q9BZE4 634 aaKnown RBP16.29■□□□□ 0.2
NME3-201ENST00000219302 AASDHPPTQ9NRN7 309 aa16.29■□□□□ 0.2
NME3-201ENST00000219302 SART1O43290 800 aaKnown RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 LATO43561 262 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 SMC2O95347 1197 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 MOCS3O95396 460 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 MOCS2O96007 188 aaPredicted RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 IGLV3-25P01717 112 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 ITGAVP06756 1048 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 C1SP09871 688 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 TACR2P21452 398 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 DRD3P35462 400 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 ACADSBP45954 432 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 PLK1P53350 603 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 ADPRHP54922 357 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 CLDN6P56747 220 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 NXPH1P58417 271 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 DNAJC3Q13217 504 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 ZC3H12AQ5D1E8 599 aaKnown RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 DENND1BQ6P3S1 775 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 OR14C36Q8NHC7 312 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 SMARCE1Q969G3 411 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 FAM149B1Q96BN6 582 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 CRELD1Q96HD1 420 aa16.28■□□□□ 0.2
NME3-201ENST00000219302 CNDP2Q96KP4 475 aaKnown RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 PRMT1Q99873 361 aaKnown RBP16.28■□□□□ 0.2
NME3-201ENST00000219302 ERVMER34-1Q9H9K5 563 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms