RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Myo19Q5SV80 963 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Shroom1Q5SX79 823 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kcnh1Q60603 989 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Scaf8Q6DID3 1268 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Msl1Q6PDM1 616 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 MaobQ8BW75 520 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Stk32cQ8QZV4 488 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc22a19Q8VCA0 551 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Lgals12Q91VD1 314 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pcdhgb4Q91XX6 912 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pcdhga4Q91XY4 930 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Sh3bp4Q921I6 962 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Asb11Q9CQ31 323 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bbs2Q9CWF6 721 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kcnd2Q9Z0V2 630 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Psmd10Q9Z2X2 231 aa9.95□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rimbp3Q3V0F0 1606 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rbbp6P97868 1790 aaKnown RBP9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tnfrsf14A0A1W2P7D5 276 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Lrrc72A0A1Y7VMI0 288 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zbed5B2RPU8 756 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pik3r2O08908 722 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pitpnm1O35954 1243 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Scg3P47867 471 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gpr143P70259 405 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Erbb2P70424 1256 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Coq7P97478 217 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pla2g6P97819 807 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PrkcqQ02111 707 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cab39Q06138 341 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Atf4Q06507 349 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 4933415F23RikQ14BX6 153 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mylk3Q3UIZ8 795 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Trappc3lQ4KL14 181 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Prkaa1Q5EG47 559 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rusc1Q8BG26 893 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Znf76Q8BMU0 568 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Fam118bQ8C569 351 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Fam20aQ8CID3 541 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mul1Q8VCM5 352 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Med30Q9CQI9 178 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PacrglQ9D3X5 248 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pdzd9Q9D9M4 266 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cib4Q9D9N5 185 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ddx24Q9ESV0 857 aaKnown RBP9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Fbxo8Q9QZN3 319 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 RbpmsQ9WVB0 197 aaKnown RBP9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ap4s1Q9WVL1 144 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Nr1h3Q9Z0Y9 445 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bcorl1A2AQH4 1781 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mkrn2osD3Z393 217 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zfp94E9Q6Y4 486 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Olfr173E9QAT7 321 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pot1bH7BX60 640 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bmp4P21275 408 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 S100bP50114 92 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Matn1P51942 500 aaKnown RBP9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Usp10P52479 792 aaKnown RBP9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc16a1P53986 493 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 InhbaQ04998 424 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Znf112Q0VAW7 879 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rnf215Q5SPX3 379 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Fam196bQ6GQV1 535 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Taf1cQ6PDZ2 836 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PoliQ6R3M4 717 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Vmn2r43Q80Z08 845 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Elmod2Q8BGF6 293 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ppm1kQ8BXN7 372 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Q8C4P0 716 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 ClmnQ8C5W0 1052 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 A430089I19RikQ8C9W1 407 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mtg1Q8R2R6 326 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Lman1lQ8VCD3 505 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Emc3Q99KI3 261 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tbc1d20Q9D9I4 402 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Copg2Q9QXK3 871 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Duox1A2AQ92 1551 aa9.94□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm10424A0A0J9YVD0 481 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm30302A0A1Y7VN40 1110 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Spats1A2RRY8 269 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cyp2b13A6H6J2 491 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Olfr600E9PUN7 314 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zfp558E9Q1J0 407 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm7971J3QMM8 481 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ap3d1O54774 1199 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PomcP01193 235 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 MutP16332 748 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 C2P21180 760 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pik3r1P26450 724 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Nedd8P29595 81 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tnni3P48787 211 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Uchl4P58321 233 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Atp6v1b2P62814 511 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rack1P68040 317 aaKnown RBP9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 SgcdP82347 289 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 NfiaQ02780 532 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Spink5Q148R4 1017 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tnni3kQ5GIG6 834 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gcnt3Q5JCT0 437 aa9.93□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cbx5Q61686 191 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms