RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Stt3bQ3TDQ1 823 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ItchQ8C863 864 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Trim61Q8JZK6 461 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pth2rQ91V95 546 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Glra3Q91XP5 464 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ogfod2Q9CQ04 349 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Snx29Q9D3S3 818 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 CabyrQ9D424 453 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PolhQ9JJN0 694 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zfp384E9Q1A5 584 aaKnown RBP16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 DcxO88809 366 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 UmpsP13439 481 aaKnown RBP16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 CalrP14211 416 aaKnown RBP16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Dpep1P31428 410 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mettl17Q3U2U7 461 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Nxpe4Q52KP5 543 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ProcrQ64695 242 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Wee2Q66JT0 555 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zbtb41Q811F1 908 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ccdc63Q8CDV6 558 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Paip2Q9D6V8 124 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 St6galnac4Q9R2B6 360 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mapk13Q9Z1B7 366 aa16.39■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Olfr600E9PUN7 314 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 StrnO55106 780 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 FynP39688 537 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Olfm3P63056 478 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ZbbxQ0P5X5 716 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cage1Q5IR70 849 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Itih3Q61704 889 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Lyve1Q8BHC0 318 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ccdc184Q8BMK5 191 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Wdr60Q8C761 999 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rps6kl1Q8R2S1 544 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rem2Q8VEL9 341 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Actrt1Q9D9J3 376 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Atp6v1c1Q9Z1G3 382 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm6370A0A0G2JGX9 315 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Osbpl8B9EJ86 889 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 DgkdE9PUQ8 1220 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm6309L7N481 315 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ptger1P35375 405 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Tac1P41539 130 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PolgP54099 1218 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 S100a5P63084 93 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 TankP70347 448 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 E330034G19RikQ3UWX6 351 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Prrt3Q6PE13 971 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Tbc1d19Q8VDV7 526 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Homer3Q99JP6 356 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 NamptQ99KQ4 491 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mbtps1Q9WTZ2 1052 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cep350E9Q309 3095 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Thsd7bQ6P4U0 1607 aa16.38■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ighv11-2A0A075B5R8 117 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pcdh7A0A0A6YY83 1255 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Armt1A6H630 439 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm6133B2RY53 190 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 2310061I04RikB8JJ69 315 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 EgfP01132 1217 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Serpinb2P12388 415 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Atxn10P28658 475 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Casp2P29594 452 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Acot8P58137 320 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zbtb16Q3UQ17 673 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Plcl1Q3USB7 1096 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 AcrbpQ3V140 540 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PkdccQ5RJI4 492 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Sema3cQ62181 751 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Plin5Q8BVZ1 463 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 B4galt3Q91YY2 395 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Fuca1Q99LJ1 452 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Arl2Q9D0J4 184 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Trim54Q9ERP3 366 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ern2Q9Z2E3 911 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Kbtbd2G3X9X1 623 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 BhmtO35490 407 aaKnown RBP16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pcsk1P63239 753 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pfkfb2P70265 519 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mpp1P70290 466 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Luc7l3Q5SUF2 432 aaKnown RBP16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Olfr8Q60892 310 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Xlr3cQ61806 226 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Slc26a2Q62273 739 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Tspan18Q80WR1 248 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Galnt5Q8C102 930 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Fam114a2Q8VE88 497 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Serbp1Q9CY58 407 aaKnown RBP16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Slamf8Q9D3G2 278 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Syap1Q9D5V6 365 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gdap2Q9DBL2 498 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PignQ9R1S3 931 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pcdh15Q99PJ1 1943 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm42715A0A087WP63 3095 aaKnown RBP16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mageb4A2A9R3 556 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Slc16a6B1AT66 607 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ptchd4B9EKX1 904 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Grip2G3XA20 1042 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Vmn2r19G5E8G4 854 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Irs1P35569 1233 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms