RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ddx28Q9CWT6 540 aaKnown RBP10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cpxm2Q9D2L5 764 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PlgrktQ9D3P8 147 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Abcb9Q9JJ59 762 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ssxb8B1AY40 170 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 A530032D15RikE9Q422 215 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Vmn2r44L7N2E1 861 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rfx2P48379 717 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Clcn3P51791 818 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nat8lQ3UGX3 299 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ankrd13bQ5F259 626 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pcsk7Q61139 770 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PhgdhQ61753 533 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Sytl5Q80T23 753 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Alkbh8Q80Y20 664 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Fam20aQ8CID3 541 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nox1Q8CIZ9 591 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 TgdsQ8VDR7 355 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc5a9Q8VDT1 685 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pcdha9Q91Y11 979 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mta3Q924K8 591 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Homer3Q99JP6 356 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zfp64Q99KE8 643 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gins4Q99LZ3 223 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Lrrc17Q9CXD9 443 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Prss23Q9D6X6 382 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Kctd4Q9D7X1 259 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cdh22Q9WTP5 813 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc2a5Q9WV38 501 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm6657A0A1B0GRJ3 277 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Dennd5bA2RSQ0 1274 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Per3O70361 1113 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cep295nlQ497N6 533 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nr1h2Q60644 446 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mapre1Q61166 268 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Znf512Q69Z99 562 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tas2r102Q7M717 329 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zic5Q7TQ40 622 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Lrrc27Q80YS5 523 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mfn1Q811U4 741 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Creb3l2Q8BH52 521 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 EmsyQ8BMB0 1264 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tigd4Q8BUZ3 513 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Usb1Q91W78 267 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Anxa13Q99JG3 317 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PompQ9CQT5 141 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mpp5Q9JLB2 675 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tmem59Q9QY73 323 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Asb1Q9WV74 336 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Plcg1Q62077 1302 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Myh8P13542 1937 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm5751A2AHC8 147 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cylc2B1AWN8 422 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Olfr600E9PUN7 314 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 FgaE9PV24 789 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Ppp4cP97470 307 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Slc45a4Q0P5V9 785 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Clec12aQ504P2 267 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rbbp7Q60973 425 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cyp3a13Q64464 503 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Zfyve28Q6ZPK7 905 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Klhl26Q8BGY4 606 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 HadhaQ8BMS1 763 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pcdha6Q91Y14 946 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tmco1Q921L3 188 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nup50Q9JIH2 466 aaKnown RBP10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nup188Q6ZQH8 1759 aa10.89□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rhox3fA2ANE1 215 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pgbd1E9Q492 415 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Adgrf2E9Q4J9 644 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Eddm13E9Q7F5 164 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tnfrsf11bO08712 401 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Crabp2P22935 138 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Abce1P61222 599 aaKnown RBP10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 PepdQ11136 493 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 BtrcQ3ULA2 605 aaKnown RBP10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 MogQ61885 246 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Klhl23Q6GQU2 558 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tas2r115Q7M719 310 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mcph1Q7TT79 822 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 4933409G03RikQ8C5U0 320 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Nlrp4bQ8C6J9 863 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 UvragQ8K245 698 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Tbc1d22aQ8R5A6 516 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Eml3Q8VC03 897 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rsph1Q8VIG3 301 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rad51cQ924H5 366 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Klhl35Q9CZ49 574 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Aff4Q9ESC8 1160 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Actl7bQ9QY83 418 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Mettl1Q9Z120 268 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm28168A0A087WNP1 180 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pramef17A2ASJ1 475 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 SmoktcrA2KF29 484 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gm5483B2RV77 97 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Vmn2r87E9PZX4 848 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Scamp3O35609 349 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 JundP15066 341 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Gsta3P30115 221 aa10.88□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Rasa2P58069 847 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms