RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Cys1Q8R4T1 145 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Olfr393Q8VGR6 312 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Sorcs3Q8VI51 1219 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ddx1Q91VR5 740 aaKnown RBP10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Frmd4bQ920B0 1035 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Pdia5Q921X9 517 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Txndc9Q9CQ79 226 aa10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ndc80Q9D0F1 642 aaKnown RBP10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Atp13a1Q9EPE9 1200 aaKnown RBP10.55□□□□□ -0.72
Clip3-201ENSMUST00000014065 Btaf1E9QAE3 1848 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Lamb2Q61292 1799 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 4930469K13RikA0A286YDB2 92 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Bclaf3A2AG58 752 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Vmn2r72D3Z4N8 856 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Vmn2r44L7N2E1 861 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 HcrtO55241 130 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Dync1i2O88487 612 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Cd3gP11942 182 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Fgl2P12804 432 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 PtpraP18052 829 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Arf4P61750 180 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 ThraP63058 492 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 PgrQ00175 926 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Meaf6Q2VPQ9 191 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Fscn2Q32M02 492 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 McuQ3UMR5 350 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Nlrc4Q3UP24 1024 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Foxred2Q3USW5 665 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gm1587Q3UT80 123 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Fam198aQ3UY90 562 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 ScinQ60604 715 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 PhgdhQ61753 533 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Brsk2Q69Z98 735 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Sema3dQ8BH34 777 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Tor1aip2Q8BYU6 502 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Twf1Q91YR1 350 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Tcaf2Q921K8 919 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Mrpl57Q9CQF8 102 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Tma16Q9CR02 221 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Pgam1Q9DBJ1 254 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Tubb3Q9ERD7 450 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Homer2Q9QWW1 354 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ruvbl2Q9WTM5 463 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Disp2Q8CIP5 1345 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Slc4a9E9PUP3 929 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Zc3h12bG3X9I7 835 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 MttpO08601 894 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 DesP31001 469 aaKnown RBP10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Asgr1P34927 284 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Micall2Q3TN34 1009 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Zfp217Q3U0X6 1041 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gm5431Q5NCB3 844 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 9930111J21Rik1Q5SVP0 844 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Slc20a1Q61609 681 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Dennd2cQ6P9P8 914 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Armc12Q80X86 340 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Prpf39Q8K2Z2 665 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Nsmce2Q91VT1 247 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Vangl2Q91ZD4 521 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Dcp2Q9CYC6 422 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Lsm12Q9D0R8 195 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 1700080O16RikQ9D9G4 284 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Dbn1Q9QXS6 706 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ly6iQ9WU67 134 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gria4Q9Z2W8 902 aa10.54□□□□□ -0.72
Clip3-201ENSMUST00000014065 Sf3b1Q99NB9 1304 aaKnown RBP10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Trim5E9PV98 497 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ifi206G3UZV2 921 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Il2P04351 169 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 LtfP08071 707 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Atxn10P28658 475 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Abhd15Q5F2F2 459 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 GapdhsQ64467 440 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Rps27lQ6ZWY3 84 aaKnown RBP10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Kcng4Q80XM3 506 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Lrrc24Q8BHA1 521 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Iars2Q8BIJ6 1012 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Daam1Q8BPM0 1077 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Suds3Q8BR65 328 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Nsl1Q8K305 281 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Pex6Q99LC9 981 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gstt4Q9D4P7 240 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ampd2Q9DBT5 798 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Stap1Q9JM90 297 aaKnown RBP10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Usp21Q9QZL6 566 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ap4s1Q9WVL1 144 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Wdr49A0A0N4SUK7 710 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Vmn2r100E9QAZ9 850 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ephx2P34914 554 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Ext2P70428 718 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gm10392Q3V3I3 114 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Clhc1Q5M6W3 596 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Vps72Q62481 368 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Fam214aQ69ZK7 1075 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Mbtd1Q6P5G3 631 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Wscd1Q80XH4 572 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Pqlc1Q80XM9 271 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 OsgepQ8BWU5 335 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Gpr20Q8BYC4 358 aa10.53□□□□□ -0.72
Clip3-201ENSMUST00000014065 Nlrp4bQ8C6J9 863 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms