RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Nrde2Q80XC6 1172 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 SvopQ8BFT9 548 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pi4kbQ8BKC8 816 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Cops7bQ8BV13 264 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Taf5Q8C092 801 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Nkiras1Q8CEC5 192 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Vps50Q8CI71 964 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Syne4Q8CII8 388 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Stard7Q8R1R3 373 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pomgnt1Q91X88 660 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pcdhb6Q91XZ4 772 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ptbp2Q91Z31 531 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tssk3Q9D2E1 268 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Caln1Q9JJG7 219 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Morc1Q9WVL5 950 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Vmn2r25W4VSP2 855 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm21083A0A0G2JFD5 256 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mocs3A2BDX3 460 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Skint1A7TZE6 364 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 1700011I03RikE9PYL8 271 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Nlrp12E9Q5R7 1054 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mroh4G3X8W1 983 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rhox6O70238 227 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Klc2O88448 599 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Soat2O88908 525 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ass1P16460 412 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Eci1P42125 289 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Dynlt1P51807 113 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Atp6v1b2P62814 511 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zscan2Q07230 614 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Samd11Q1RNF8 542 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pik3r6Q3U6Q4 756 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pitpnm3Q3UHE1 974 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zfp953Q3UPV7 304 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rab26Q504M8 260 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Fam160a1Q505K2 1081 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mylk4Q5SUV5 386 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 PigaQ64323 485 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Exoc3l4Q6DIA2 721 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Sox11Q7M6Y2 395 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Elac2Q80Y81 831 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Cwf19l2Q8BG79 887 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 StgQ8BM15 349 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Phactr3Q8BYK5 558 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pak5Q8C015 719 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Serpinb10Q8K1K6 397 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mkl1Q8K4J6 964 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc35c2Q8VCX2 364 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zcchc18Q8VD24 393 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Nr3c2Q8VII8 978 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pacsin3Q99JB8 424 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rnf111Q99ML9 989 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 NwcQ9CQI4 244 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CygbQ9CX80 190 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 1700080O16RikQ9D9G4 284 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Chst7Q9EP78 484 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ccr10Q9JL21 362 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Stap1Q9JM90 297 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trpc3Q9QZC1 836 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Taf1Q80UV9 1891 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Olfr675A0A1B0GSE1 317 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Gm3371F7CQW8 167 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Gm4758L7N258 96 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Hcn4O70507 1186 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 IapP03975 557 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Camk4P08414 469 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 RxrgP28705 463 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 DesP31001 469 aaKnown RBP12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 HmgcrQ01237 887 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Trafd1Q3UDK1 580 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Kctd21Q3URF8 260 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Trim67Q505D9 768 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Htr1aQ64264 421 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 2700097O09RikQ6PGK3 301 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 SybuQ8BHS8 665 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Dhx32Q8BZS9 744 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Lacc1Q8BZT9 430 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 RtknQ8C6B2 564 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Aph1bQ8C7N7 257 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Calhm4Q8CE93 315 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 H2-Q4Q8HWB2 354 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Snapc1Q8K0S9 389 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Dedd2Q8QZV0 330 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Rnf112Q96DY5 654 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Krcc1Q99JT5 256 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 NonoQ99K48 473 aaKnown RBP12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Rwdd4Q9CPR1 188 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Ttc25Q9D4B2 624 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Atg7Q9D906 698 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Atp11cQ9QZW0 1129 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Gyg1Q9R062 333 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Apobec2Q9WV35 224 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Tle6Q9WVB3 581 aa12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 VarsQ9Z1Q9 1263 aaKnown RBP12.33□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Mkrn2osD3Z393 217 aa12.32□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Pcsk6F6XJP7 959 aa12.32□□□□□ -0.44
Ufd1-201ENSMUST00000005394 CenpaO35216 134 aa12.32□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Olfm1O88998 485 aa12.32□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Pgk2P09041 417 aa12.32□□□□□ -0.44
Ufd1-201ENSMUST00000005394 Aldh3a1P47739 453 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms