RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 SLC13A5Q86YT5 568 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 ZDHHC17Q8IUH5 632 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 KATNAL2Q8IYT4 538 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 ARL14EPQ8N8R7 260 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 CCDC26Q8TAB7 109 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 JOSD2Q8TAC2 188 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 SH3RF2Q8TEC5 729 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 FUBP3Q96I24 572 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 HNRNPABQ99729 332 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 VPS45Q9NRW7 570 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 STIM2Q9P246 746 aa12.35□□□□□ -0.43
ERGIC3-220ENST00000640748 E5RJQ4 531 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 APBB3O95704 486 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 CKMP06732 381 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 TCF3P15923 654 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 DESP17661 470 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 RFC1P35251 1148 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 OPRD1P41143 372 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 MAGEA11P43364 429 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 USP46P62068 366 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 OGDHQ02218 1023 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 HADHQ16836 314 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 PMF1Q6P1K2 205 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 MAATS1Q7Z4T9 603 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 TMEM110Q86TL2 294 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 SLC2A14Q8TDB8 520 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 USP33Q8TEY7 942 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ZNF638Q14966 1978 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
ERGIC3-220ENST00000640748 ANAPC1Q9H1A4 1944 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 BCLAF3A2AJT9 711 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 F8VP50 259 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 K7EQS6 105 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SART1O43290 800 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 RAD51CO43502 376 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 ATP8B1O43520 1251 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 PHF2O75151 1096 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 RNF8O76064 485 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 HEXIM1O94992 359 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 ZRANB2O95218 330 aaKnown RBP eCLIP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 KCNK5O95279 499 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 GPD1P21695 349 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 TNFRSF8P28908 595 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 PCSK1P29120 753 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 GJC1P36383 396 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SCNN1AP37088 669 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 IFNAR2P48551 515 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SLC7A5Q01650 507 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SLC6A3Q01959 620 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 MESP2Q0VG99 397 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 MDH1BQ5I0G3 518 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 CCNI2Q6ZMN8 369 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SFTPA1Q8IWL2 248 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 IFT20Q8IY31 132 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 RCOR2Q8IZ40 523 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 RBM41Q96IZ5 413 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 DUSP16Q9BY84 665 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 DMGDHQ9UI17 866 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 INVSQ9Y283 1065 aa12.33□□□□□ -0.44
ERGIC3-220ENST00000640748 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 TULP2O00295 520 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 PIK3R2O00459 728 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 KRT1P04264 644 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 KRT7P08729 469 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 HNRNPLP14866 589 aaKnown RBP eCLIP12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 HDCP19113 662 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 BCKDHBP21953 392 aa12.32□□□□□ -0.44
ERGIC3-220ENST00000640748 BDNFP23560 247 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms