RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 GOLGA6L7A0A1B0GV03 622 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 TARSL2A2RTX5 802 aaKnown RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 TBL1XO60907 577 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 LTFP02788 710 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 CD19P15391 556 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 SLC11A2P49281 568 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 STILQ15468 1287 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 C9orf64Q5T6V5 341 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 TMPRSS12Q86WS5 348 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 MYEOVQ96EZ4 313 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 FCRL2Q96LA5 508 aaPredicted RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 PRICKLE1Q96MT3 831 aaPredicted RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 FZD4Q9ULV1 537 aa17.06■□□□□ 0.32
CLN3-255ENST00000637100 TPX2Q9ULW0 747 aaKnown RBP17.06■□□□□ 0.32
CLN3-255ENST00000637100 A0A1W2PR77 199 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 KCNK3O14649 394 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 SIN3BO75182 1162 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 FBXO21O94952 628 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 FSBPO95073 299 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 WNT1P04628 370 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 SRPRAP08240 638 aaKnown RBP17.05■□□□□ 0.32
CLN3-255ENST00000637100 CCR5P51681 352 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 TBX4P57082 545 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
CLN3-255ENST00000637100 EIF4EBP2Q13542 120 aaPredicted RBP17.05■□□□□ 0.32
CLN3-255ENST00000637100 KCNJ12Q14500 433 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 SHBQ15464 509 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
CLN3-255ENST00000637100 SNX19Q92543 992 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 FAM129BQ96TA1 746 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 SERGEFQ9UGK8 458 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
CLN3-255ENST00000637100 CNTN6Q9UQ52 1028 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
CLN3-255ENST00000637100 KNTC1P50748 2209 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 C1SP09871 688 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 CDK4P11802 303 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 LCP1P13796 627 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 CSKP41240 450 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 FMO5P49326 533 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
CLN3-255ENST00000637100 CYP4F3Q08477 520 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 CST6Q15828 149 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 MS4A13Q5J8X5 152 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 TCERG1LQ5VWI1 586 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 LAYNQ6UX15 382 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 MFN1Q8IWA4 741 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 FMR1NBQ8N0W7 255 aaPredicted RBP17.04■□□□□ 0.32
CLN3-255ENST00000637100 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 SAP25Q8TEE9 199 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 BBC3Q96PG8 261 aaPredicted RBP17.04■□□□□ 0.32
CLN3-255ENST00000637100 ELF4Q99607 663 aaPredicted RBP17.04■□□□□ 0.32
CLN3-255ENST00000637100 DDX50Q9BQ39 737 aaKnown RBP17.04■□□□□ 0.32
CLN3-255ENST00000637100 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 RMND1Q9NWS8 449 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 FBXL12Q9NXK8 326 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 TLR6Q9Y2C9 796 aa17.04■□□□□ 0.32
CLN3-255ENST00000637100 GOLGA4Q13439 2230 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 LATO43561 262 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 MEA1Q16626 185 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 INAVAQ3KP66 663 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 DCAF17Q5H9S7 520 aaPredicted RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 FOXR2Q6PJQ5 311 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 TMEM270Q6UE05 265 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 MARCH9Q86YJ5 346 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 CACTIN-AS1Q8N1I8 211 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 CLEC4CQ8WTT0 213 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 HNRNPLLQ8WVV9 542 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 TSC1Q92574 1164 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 ACE2Q9BYF1 805 aaPredicted RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 GTPBP4Q9BZE4 634 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 ERVMER34-1Q9H9K5 563 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 METTL14Q9HCE5 456 aaKnown RBP17.03■□□□□ 0.32
CLN3-255ENST00000637100 ERVW-1Q9UQF0 538 aa17.03■□□□□ 0.32
CLN3-255ENST00000637100 PLXNA2O75051 1894 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 MID1O15344 667 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 P4HA2O15460 535 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 YKT6O15498 198 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 IGLV3-25P01717 112 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 GPD2P43304 727 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 RXRGP48443 463 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 RGS7P49802 495 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 ST8SIA6P61647 398 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 GCNT1Q02742 428 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 PNOCQ13519 176 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 DCAF6Q58WW2 860 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 PITRM1Q5JRX3 1037 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms