RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 DNAJB1P25685 340 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 STIP1P31948 543 aaKnown RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 ERVFC1P60507 584 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 ALFQ53S48 1182 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 RAP1GAP2Q684P5 730 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 FIBCD1Q8N539 461 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 ZNF419Q96HQ0 510 aaPredicted RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 AGAP3Q96P47 875 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 EPAS1Q99814 870 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 RNF38Q9H0F5 515 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 GOLGA6AQ9NYA3 693 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 BACE2Q9Y5Z0 518 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 ZNF487B1APH4 448 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 E9PAM4 449 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 IRF1P10914 325 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 GJA1P17302 382 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 SSTR1P30872 391 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 CRADDP78560 199 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 FOXR1Q6PIV2 292 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 DDX53Q86TM3 631 aaKnown RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 PSTKQ8IV42 348 aaKnown RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 PPIL6Q8IXY8 311 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 CFAP52Q8N1V2 620 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 SERPINB11Q96P15 392 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 MRPL17Q9NRX2 175 aaKnown RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 UBP1Q9NZI7 540 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 AFF4Q9UHB7 1163 aaKnown RBP14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 TBK1Q9UHD2 729 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 TTLL3Q9Y4R7 772 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 PLXNA3P51805 1871 aa14.05□□□□□ -0.16
SMARCA2-254ENST00000636903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 TLL1O43897 1013 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 TTC4O95801 387 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 CPP00450 1065 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 WASHC5Q12768 1159 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 PAFAH1B3Q15102 231 aaKnown RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 MS4A13Q5J8X5 152 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ANKRD20A2Q5SQ80 823 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ANKRD20A1Q5TYW2 823 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ANKRD20A3Q5VUR7 823 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 IGSF8Q969P0 613 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 SLC39A13Q96H72 371 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 C17orf80Q9BSJ5 609 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 NACA2Q9H009 215 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 RABEP2Q9H5N1 569 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 CHMP2BQ9UQN3 213 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 TLR6Q9Y2C9 796 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 COL4A4P53420 1690 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 PLXNA4Q9HCM2 1894 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 TGM5O43548 720 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 USP12O75317 370 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 RTN3O95197 1032 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 MYZAPP0CAP1 466 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ZFXP17010 805 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 NR2C2P49116 596 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ZBTB17Q13105 803 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 KCNJ11Q14654 390 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 EFTUD2Q15029 972 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 TAF12Q16514 161 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 HIF1AQ16665 826 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ZNF567Q8N184 647 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 KLC2Q9H0B6 622 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 CERS4Q9HA82 394 aa14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ZNF334Q9HCZ1 680 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
SMARCA2-254ENST00000636903 ZNF840PA6NDX5 716 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 COCHO43405 550 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 BAIAP3O94812 1187 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 PSMB4P28070 264 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 ALDH1A3P47895 512 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 PLPP4Q5VZY2 271 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 HERC6Q8IVU3 1022 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 MPP5Q8N3R9 675 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 BHMTQ93088 406 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 VPS37BQ9H9H4 285 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 TMBIM4Q9HC24 238 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 CLGNO14967 610 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 CXCL14O95715 111 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 NUDT17P0C025 328 aa14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 TUFMP49411 452 aaKnown RBP14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 MLLT6P55198 1093 aaPredicted RBP14.03□□□□□ -0.16
SMARCA2-254ENST00000636903 EIF3BP55884 814 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms